CX288876

Overview
NameCX288876
Unique NameCX288876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_USTMA (Mitogen-activated protein kinase HOG1 OS=Ustilago maydis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.424e-49
Identity = 102/188 (54.26%), Postives = 135/188 (71.81%), Query Frame = 2
Query:   38 YVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +V+ +I G +F+V+++YV  LQP+G GA+G+VCSA +  T   VAIKKI   F   + +KR  RE+KLL H+ HENI+ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ+LRGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    4 FVKLSIFGTVFEVTTRYVD-LQPVGMGAFGLVCSANDQLTSTSVAIKKIMKPFSTPVLSKRTYRELKLLKHIRHENIISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK14_RAT (Mitogen-activated protein kinase 14 OS=Rattus norvegicus GN=Mapk14 PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49
Identity = 97/179 (54.19%), Postives = 130/179 (72.63%), Query Frame = 2
Query:   65 LFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +++V  +Y   L P+G GAYG VC+A +++T   VA+KK++  F + I AKR  RE++LL HM HEN++ + D+  P    E+FNDVY+V  LM  DL+ I++  Q LTDDH Q+ +YQ+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T   D MT YV TRWYRAP
Sbjct:   17 VWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_PHANO (Mitogen-activated protein kinase HOG1 OS=Phaeosphaeria nodorum GN=HOG1 PE=3 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49
Identity = 101/189 (53.44%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VAIKKI   F   + +KR  RE+KLL H+ HENI+ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ+LRGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTSQAVAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_CRYPA (Mitogen-activated protein kinase HOG1 OS=Cryphonectria parasitica GN=HOG1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49
Identity = 101/189 (53.44%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VAIKKI   F   + AKR  RE+KLL H+ HENI+ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ++RGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_CHAGB (Mitogen-activated protein kinase HOG1 OS=Chaetomium globosum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49
Identity = 100/189 (52.91%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VAIKKI   F   + AKR  RE+KLL H+ HEN++ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ++RGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSAKDQLTSQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_ALTBR (Mitogen-activated protein kinase HOG1 OS=Alternaria brassicicola GN=HOG1 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.779e-49
Identity = 101/189 (53.44%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VAIKKI   F   + +KR  RE+KLL H+ HENI+ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ+LRGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTSQAVAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MK14_XENLA (Mitogen-activated protein kinase 14 OS=Xenopus laevis GN=mapk14 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.547e-49
Identity = 97/179 (54.19%), Postives = 128/179 (71.51%), Query Frame = 2
Query:   65 LFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            L++V  +Y   L P+G GAYG VCS+ ++ T   +A+KK++  F + I AKR  RE++LL HM HEN++ + D+  P    E+FNDVY+V  LM  DL+ I++  Q LTDDH Q+ +YQ+LRGLKYIHSA ++HRDLKPSNL +N +C+LKI DFGLAR T E   MT YV TRWYRAP
Sbjct:   18 LWEVPDRY-QNLTPVGSGAYGSVCSSFDTRTALRIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFSPAKSFEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAGIIHRDLKPSNLAVNEDCELKILDFGLARHTDEE--MTGYVATRWYRAP 192          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_NEUCR (Mitogen-activated protein kinase hog-1 OS=Neurospora crassa GN=hog-1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.547e-49
Identity = 99/189 (52.38%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++++  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VAIKKI   F   + AKR  RE+KLL H+ HEN++ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ++RGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFIRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSAKDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_MAGGR (Mitogen-activated protein kinase HOG1 OS=Magnaporthe grisea GN=HOG1 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.547e-49
Identity = 100/189 (52.91%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VAIKKI   F   + AKR  RE+KLL H+ HEN++ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ++RGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLKHENVISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDFGLARI--QDPQMTGYVSTRYYRAP 182          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: HOG1_COCIM (Mitogen-activated protein kinase HOG1 OS=Coccidioides immitis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.547e-49
Identity = 99/189 (52.38%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   35 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI-IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            ++V+  I G  F+++++Y   LQP+G GA+G+VCSA +  T + VA+KKI   F   + AKR  RE+KLL H+ HEN++ + DI I P++     D+Y V EL+ TDLH+++ S+  L     QYFLYQ+LRGLKY+HSA V+HRDLKPSN+L+N NCDLKICDFGLAR   +   MT YV TR+YRAP
Sbjct:    3 EFVRAQIFGTTFEITTRYTD-LQPVGMGAFGLVCSARDQLTNQAVAVKKIMKPFSTPVLAKRTYRELKLLKHLRHENVISLSDIFISPLE-----DIYFVTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARV--QDPQMTGYVSTRYYRAP 182          
The following BLAST results are available for this feature:
BLAST of CX288876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HOG1_USTMA4.424e-4954.26Mitogen-activated protein kinase HOG1 OS=Ustilago ... [more]
MK14_RAT5.779e-4954.19Mitogen-activated protein kinase 14 OS=Rattus norv... [more]
HOG1_PHANO5.779e-4953.44Mitogen-activated protein kinase HOG1 OS=Phaeospha... [more]
HOG1_CRYPA5.779e-4953.44Mitogen-activated protein kinase HOG1 OS=Cryphonec... [more]
HOG1_CHAGB5.779e-4952.91Mitogen-activated protein kinase HOG1 OS=Chaetomiu... [more]
HOG1_ALTBR5.779e-4953.44Mitogen-activated protein kinase HOG1 OS=Alternari... [more]
MK14_XENLA7.547e-4954.19Mitogen-activated protein kinase 14 OS=Xenopus lae... [more]
HOG1_NEUCR7.547e-4952.38Mitogen-activated protein kinase hog-1 OS=Neurospo... [more]
HOG1_MAGGR7.547e-4952.91Mitogen-activated protein kinase HOG1 OS=Magnaport... [more]
HOG1_COCIM7.547e-4952.38Mitogen-activated protein kinase HOG1 OS=Coccidioi... [more]

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Properties
Property NameValue
Genbank descriptionC02006D09SK IF1 Citrus clementina cDNA clone C02006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288876 ID=CX288876; Name=CX288876; organism=Citrus clementina; type=EST; length=598bp
GATGAAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACA
ATATTCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTATGTTCCTCCTCTT
CAGCCTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTC
AGAGACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATA
ACAGGATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCAC
ATGACTCATGAGAATATTGTCAAGGTGAAGGACATAATACCACCGATGGA
TAAGGAAAAGTTCAATGACGTTTATATTGTATATGAGTTGATGGATACTG
ATCTGCATCAGATAATACGCTCCAAACAGGCTCTGACTGATGATCATTGT
CAGTATTTCCTATACCAATTGCTGCGGGGACTGAAGTACATACACTCTGC
TAATGTTTTGCACCGAGATTTAAAACCAAGCAACCTGCTGCTCAATGCAA
ACTGTGATCTTAAGATTTGTGACTTTGGACTAGCAAGAACCACTTCAGAG
ACAGATTTCATGACGGAGTATGTTGTAACCCGATGGTATCGAGCCCCT
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