CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_LODEL (ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus GN=DBP3 PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.595e-22 Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E++L R+ +KVAAIHG +Q +RT++L FK G C L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHR+GRT Sbjct: 390 IESLLHRNKFKVAAIHGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDIPNVKYVINLTFPLTIEDYVHRLGRT 465
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_CANAL (ATP-dependent RNA helicase DBP3 OS=Candida albicans GN=DBP3 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.595e-22 Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +EN L+R+ + VAAIHG +Q +RT +LS FK G L++ATDVAARGLDIP+V+VVIN +FPLT EDYVHRIGRT Sbjct: 416 IENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRT 491
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_ASPFU (ATP-dependent RNA helicase dbp3 OS=Aspergillus fumigatus GN=dbp3 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.595e-22 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +LR +KVA IHG QHER KSL FK G+ ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 354 VERLLRSKNFKVAGIHGDLNQHERFKSLEAFKTGSATVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRT 429
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_NEUCR (ATP-dependent RNA helicase dbp-3 OS=Neurospora crassa GN=dbp-3 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.308e-22 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L R G KVA+IHG Q +RT+SL FK GT ++VATDVAARGLDIP+V++VIN +FPLT EDYVHRIGRT Sbjct: 466 VEQFLSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRT 541
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_NEOFI (ATP-dependent RNA helicase dbp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp3 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.308e-22 Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +LR +KVA IHG QHER KSL FK G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 354 VERLLRTKNFKVAGIHGDLNQHERFKSLEAFKTGAATVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRT 429
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_DEBHA (ATP-dependent RNA helicase DBP3 OS=Debaryomyces hansenii GN=DBP3 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.544e-22 Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +EN+L R+ +KV+A+HG +Q +RT +L FK G L++ATDVAARGLDIP+V+VVIN +FPLT EDYVHRIGRT Sbjct: 379 IENLLVRNSFKVSAVHGDLSQQQRTSALGAFKAGKTTLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRT 454
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_EMENI (ATP-dependent RNA helicase dbp3 OS=Emericella nidulans GN=dbp3 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +LR G+KVA IHG +Q ER +SL FK G ++VATDVAARGLDIP V++V+N +FPLT EDYVHRIGRT Sbjct: 339 VERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRT 414
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_ASHGO (ATP-dependent RNA helicase DBP3 OS=Ashbya gossypii GN=DBP3 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21 Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L+ +G+ VAAIHG +Q +RT++LS FK GT L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRT Sbjct: 387 VERNLKYNGYNVAAIHGDLSQQQRTQALSEFKAGTANLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 462
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_YARLI (ATP-dependent RNA helicase DBP3 OS=Yarrowia lipolytica GN=DBP3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.126e-21 Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +EN L R G+ VAAIHG +Q +RTK+L FK+G +++ATDVAARGLDIP+V++VIN +FPLT EDYVHRIGRT Sbjct: 384 VENTLTRRGYGVAAIHGDLSQQQRTKALDEFKKGEKNILLATDVAARGLDIPNVKLVINLTFPLTVEDYVHRIGRT 459
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_KLULA (ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis GN=DBP3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.126e-21 Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L+ +G+ VAAIHG +Q +RT++L+ FK G C L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRT Sbjct: 356 VERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 431 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |