CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_ASPOR (ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae GN=dbp3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.126e-21 Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +LR G+KVA IHG +Q ER +SL FK G ++VATDVAARGLDIP V+ VIN +FPLT EDYVHRIGRT Sbjct: 349 IERLLRTKGFKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGLDIPSVKQVINVTFPLTVEDYVHRIGRT 424
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_AJECN (ATP-dependent RNA helicase DBP3 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP3 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.627e-21 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +R G+KVA IHG Q ER SL FK G+ P++VATDVAARGLDIP V++V+N +FPLT EDYVHRIGRT Sbjct: 338 IERFIRSKGFKVAGIHGDMNQTERFNSLDAFKSGSVPVLVATDVAARGLDIPAVKLVLNVTFPLTVEDYVHRIGRT 413
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_ASPNC (ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.737e-21 Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E +L G+KVA IHG Q ER KSL FK+G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 346 VERLLWNKGFKVAGIHGDLGQQERFKSLESFKKGVSTVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRT 421
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_CANGA (ATP-dependent RNA helicase DBP3 OS=Candida glabrata GN=DBP3 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.079e-21 Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L +G+KVAAIHG +Q +RT++L+ FK G L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRT Sbjct: 392 VERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 467
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_ASPTN (ATP-dependent RNA helicase dbp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp3 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.055e-20 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L+ G+KVA IHG +Q ER +SL FK G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRT Sbjct: 344 IERFLQSRGFKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGLDIPAVKLVINVTFPLTVEDYVHRIGRT 419
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_CHAGB (ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum GN=DBP3 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.378e-20 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L R G +V +IHG Q +RT+SL FK GT ++VATDVAARGLDIP+V++VIN +FPLT EDYVHRIGRT Sbjct: 468 VEQNLERRGIRVCSIHGDLRQDQRTRSLESFKAGTTSVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRT 543
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_YEAST (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae GN=DBP3 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.800e-20 Identity = 47/76 (61.84%), Postives = 61/76 (80.26%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L+ +G+ VAAIHG +Q +RT++L+ FK G L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRT Sbjct: 375 VERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 450
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_YEAS7 (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20 Identity = 46/76 (60.53%), Postives = 61/76 (80.26%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E L+ +G+ +AAIHG +Q +RT++L+ FK G L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRT Sbjct: 375 VERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 450
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20 Identity = 44/72 (61.11%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LR GW AIHG K Q ER + L+ FK G P+M ATDVAARGLD+ D++ V+NY FP T EDY+HRIGRT Sbjct: 430 LRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRT 501
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP3_COCIM (ATP-dependent RNA helicase DBP3 OS=Coccidioides immitis GN=DBP3 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.010e-20 Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 +E + G+KVA IHG +Q ER +SL FK G+ L+VATDVAARGLDIP V++V+N +FPLT EDYVHRIGRT Sbjct: 366 VERFIGSKGFKVAGIHGDMSQTERFRSLEAFKSGSISLLVATDVAARGLDIPAVKLVLNVTFPLTIEDYVHRIGRT 441 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |