CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RHLB_ECO55 (ATP-dependent RNA helicase rhlB OS=Escherichia coli (strain 55989 / EAEC) GN=rhlB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L G +V + G AQ +R + L F G ++VATDVAARGL IP V V NY P EDYVHRIGRT Sbjct: 276 LAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RHLB_ECO45 (ATP-dependent RNA helicase rhlB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rhlB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L G +V + G AQ +R + L F G ++VATDVAARGL IP V V NY P EDYVHRIGRT Sbjct: 276 LAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RHLB_ECO27 (ATP-dependent RNA helicase rhlB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rhlB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L G +V + G AQ +R + L F G ++VATDVAARGL IP V V NY P EDYVHRIGRT Sbjct: 276 LAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RHLB_ECO24 (ATP-dependent RNA helicase rhlB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rhlB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L G +V + G AQ +R + L F G ++VATDVAARGL IP V V NY P EDYVHRIGRT Sbjct: 276 LAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RHLB_CITK8 (ATP-dependent RNA helicase rhlB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=rhlB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L G +V + G AQ +R + L F G ++VATDVAARGL IP V V NY P EDYVHRIGRT Sbjct: 276 LAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRT 347
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: MS116_ASPOR (ATP-dependent RNA helicase mss116, mitochondrial OS=Aspergillus oryzae GN=mss116 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 33 KVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 KV IH + +Q RTK+ +LFKE +M A+DV RG+D P+V++VI P E YVHR+GRT Sbjct: 378 KVFEIHSRLSQSARTKTTALFKEAATGIMFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRT 443
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + +R + + V+++HG Q ER ++ F+ GT +++ TDV ARGLD+ V +VINY P E Y+HRIGR+ Sbjct: 273 LTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRS 348
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L L +S + V ++HG Q ER K ++ F+ G ++++TDV ARG+D+ V +VINY P E+Y+HRIGR+ Sbjct: 281 LSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRS 356
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L L +S + V ++HG Q ER K ++ F+ G ++++TDV ARG+D+ V +VINY P E+Y+HRIGR+ Sbjct: 281 LSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRS 356
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.954e-12 Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L +R + + V+++HG+ Q ER ++ F+ G +++ TDV ARG+D+ V +VINY P + E+Y+HRIGR+ Sbjct: 278 LTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRS 353 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |