CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.753e-18 Identity = 47/74 (63.51%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 9 NMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 N+ R G AAIHG K+Q ER LS F+ G P++VATDVAARGLDI D+ VVINY FP EDYVHRIGRT Sbjct: 409 NLTRNFG--AAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRT 480
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.902e-18 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q ER L+ FK G P+MVATDVA+RG+D+ D+ V+NY +P +EDY+HRIGRT Sbjct: 382 ITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRT 457
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_ASPFU (ATP-dependent RNA helicase dbp2 OS=Aspergillus fumigatus GN=dbp2 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.902e-18 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q ER L+ FK G P+MVATDVA+RG+D+ D+ V+NY +P +EDY+HRIGRT Sbjct: 384 ITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRT 459
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus GN=dbp2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.902e-18 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q ER L+ FK G P+MVATDVA+RG+D+ D+ V+NY +P +EDY+HRIGRT Sbjct: 388 ITRFLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRT 463
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_PICST (ATP-dependent RNA helicase DED1 OS=Pichia stipitis GN=DED1 PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 6.402e-18 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L G+ AIHG ++Q+ER K+L+ FK G P++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 441 LADFLYDQGFPATAIHGDRSQYEREKALAAFKSGAAPILVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRIGRT 516
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_LODEL (ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus GN=DED1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.402e-18 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L G+ AIHG ++Q+ER K+L+ FK G P++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 448 LADFLYDQGFPATAIHGDRSQYEREKALAAFKSGQAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRT 523
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_CANAL (ATP-dependent RNA helicase DED1 OS=Candida albicans GN=DED1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.402e-18 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L G+ AIHG ++Q+ER K+L+ FK G P++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 459 LADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRT 534
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_CHAGB (ATP-dependent RNA helicase DED1 OS=Chaetomium globosum GN=DED1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + +IHG + Q ER ++L LF+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 472 LSDFLINQNFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRT 547
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Pichia guilliermondii GN=DBP2 PE=3 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + + LR GW AIHG K Q+ER L FK G P+MVATDVAARG+D+ + VINY P EDYVHRIGRT Sbjct: 388 ITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRT 463
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LEN L +G+ +IHG + Q ER +L FK G P++VATDVAARGLDIP V VIN+ P +DYVHRIGRT Sbjct: 444 LENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRT 519 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |