CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH46_ARATH (DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana GN=RH46 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 9 NMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 N+ R G AAIHG K+Q ER L+ F+ G P++VATDVAARGLD+ D+ VV+NY FP EDYVHRIGRT Sbjct: 425 NLTRTFG--AAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRT 496
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_NEOFI (ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + AIHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 468 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRT 543
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_ASPOR (ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae GN=ded1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + AIHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 464 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRT 539
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_ASPNC (ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ded1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + AIHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 465 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRT 540
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_ASPFU (ATP-dependent RNA helicase ded1 OS=Aspergillus fumigatus GN=ded1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + AIHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 466 LSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRT 541
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_NEUCR (ATP-dependent RNA helicase dbp-2 OS=Neurospora crassa GN=dbp-2 PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q+ER L FK G P+MVATDVA+RG+D+ ++ V+NY +P +EDY+HRIGRT Sbjct: 397 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT 472
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_MAGGR (ATP-dependent RNA helicase DBP2 OS=Magnaporthe grisea GN=DBP2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q+ER L FK G P+MVATDVA+RG+D+ ++ V+NY +P +EDY+HRIGRT Sbjct: 390 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT 465
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae GN=DBP2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q+ER L FK G P+MVATDVA+RG+D+ ++ V+NY +P +EDY+HRIGRT Sbjct: 397 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT 472
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum GN=DBP2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q+ER L FK G P+MVATDVA+RG+D+ ++ V+NY +P +EDY+HRIGRT Sbjct: 401 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT 476
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata GN=DBP2 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.426e-17 Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + + LR+ GW AIHG K Q ER L+ F+ G P+MVATDVAARG+D+ + V+NY P EDYVHRIGRT Sbjct: 373 ITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRT 448 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |