CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 43/76 (56.58%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L L G+ AIHG + Q ER +L FK G P+MVATDVA+RGLD+P+V VINY P + EDYVHRIGRT Sbjct: 367 LRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRT 442
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 43/76 (56.58%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LEN L +G+ +IHG + Q ER +L FK G P++VATDVAARGLDIP V VIN+ P +DYVHRIGRT Sbjct: 449 LENWLYTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRT 524
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH14_ARATH (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 9 NMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 N+ R+ G AAIHG K+Q ER L+ F+ G P++VATDVAARGLD+ D+ V+NY FP EDYVHRIGRT Sbjct: 422 NLTRQFG--AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRT 493
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_BOTFB (ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain B05.10) GN=ded1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + +IHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V+ V+NY P +DYVHRIGRT Sbjct: 461 LSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVKHVVNYDLPTDIDDYVHRIGRT 536
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_NEUCR (ATP-dependent RNA helicase ded-1 OS=Neurospora crassa GN=ded-1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + +IHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 469 LSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRT 544
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_MAGGR (ATP-dependent RNA helicase DED1 OS=Magnaporthe grisea GN=DED1 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L+ +IHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V VINY P +DYVHRIGRT Sbjct: 465 LSDFLQNQNLPATSIHGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRT 540
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP8_LODEL (ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus GN=DBP8 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L MLR+ +KVA++H + Q ERT SL FK G +++ATDVA+RGLDIP VE+V+N+ P +D++HR+GRT Sbjct: 272 LRRMLRKLEFKVASLHSEMPQTERTNSLHRFKAGAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRT 347
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP8_CANAL (ATP-dependent RNA helicase DBP8 OS=Candida albicans GN=DBP8 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L MLR+ ++VA++H + Q ERT SL FK G +++ATDVA+RGLDIP VE+VIN+ P +D++HR+GRT Sbjct: 269 LRRMLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRT 344
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_YEAST (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae GN=DBP2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LR GW AIHG K Q ER L F+ G P+MVATDVAARG+D+ + VINY P EDYVHRIGRT Sbjct: 380 LREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRT 451
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_YEAS7 (ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LR GW AIHG K Q ER L F+ G P+MVATDVAARG+D+ + VINY P EDYVHRIGRT Sbjct: 380 LREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRT 451 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |