CX288877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q+ER L+ FK G P+MVATDVA+RG+D+ ++ V NY +P +EDY+HRIGRT Sbjct: 412 ITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRT 487
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.433e-17 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + LR+ GW +IHG K Q+ER L+ FK G P+MVATDVA+RG+D+ ++ V NY +P +EDY+HRIGRT Sbjct: 365 ITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRT 440
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_SCLS1 (ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.177e-17 Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + +IHG + Q ER ++L +F+ G CP++VAT VAARGLDIP+V V+NY P +DYVHRIGRT Sbjct: 461 LSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRT 536
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.149e-17 Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LEN L +G+ +IHG + Q ER +L FK G P++VATDVAARGLDIP V V+N+ P +DYVHRIGRT Sbjct: 434 LENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 509
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_COCIM (ATP-dependent RNA helicase DED1 OS=Coccidioides immitis GN=DED1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.149e-17 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L L + AIHG + Q ER ++L F+ G CP++VAT VAARGLDIP+V V+NY P +DYVHRIGRT Sbjct: 452 LSEFLINQNFPATAIHGDRTQRERERALEYFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRT 527
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_LODEL (ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus GN=DBP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.149e-17 Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 15 LRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 LR GW AIHG K QHER L F++G+ +MVATDVAARG+D+ + V+NY P EDYVHRIGRT Sbjct: 383 LRADGWPALAIHGDKEQHERDWVLKEFRQGSHSIMVATDVAARGIDVKGITHVVNYDMPGNIEDYVHRIGRT 454
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP2_DEBHA (ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii GN=DBP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.149e-17 Identity = 43/76 (56.58%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 + N LR GW AIHG K Q ER L FK G P+MVATDVAARG+D+ + VIN P EDYVHRIGRT Sbjct: 368 ITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRT 443
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_USTMA (ATP-dependent RNA helicase DED1 OS=Ustilago maydis GN=DED1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.419e-17 Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L RS +IHG + Q ER ++L LF+ G P+MVAT VAARGLDIP+V V+NY P +DYVHRIGRT Sbjct: 466 LSDFLLRSKIGATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNYDLPSDVDDYVHRIGRT 541
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DED1_GIBZE (ATP-dependent RNA helicase DED1 OS=Gibberella zeae GN=DED1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.419e-17 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L + L + +IHG + Q ER ++L F+ G CP++VAT VAARGLDIP V VINY P +DYVHRIGRT Sbjct: 461 LSDFLINQNFPATSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPHVTHVINYDLPTDVDDYVHRIGRT 536
BLAST of CX288877 vs. ExPASy Swiss-Prot
Match: DBP8_DEBHA (ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii GN=DBP8 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.419e-17 Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 3 LENMLRRSGWKVAAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRT 230 L LR+ ++VA++H + Q ERT SL FK G +++ATDVA+RGLDIP VE+V+NY P +D++HR+GRT Sbjct: 269 LRRTLRKLEFRVASLHSEMPQTERTNSLHRFKAGAAKILIATDVASRGLDIPTVELVVNYDIPADADDFIHRVGRT 344 The following BLAST results are available for this feature:
BLAST of CX288877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288877 ID=CX288877; Name=CX288877; organism=Citrus clementina; type=EST; length=231bpback to top |