CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC1_BACHD (Probable adenylyl-sulfate kinase OS=Bacillus halodurans GN=BH1489 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.851e-42
Identity = 82/136 (60.29%), Postives = 102/136 (75.00%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KSTLA +++++L+  G  SY+LDGDN+RHGLN  L FS EDR ENIRR+GEVAKLF DAG++   + ISP+R+DRD  R +L D  FIEV++  PLE CE RDPKGLYK AR+G I  FTGI  PYE P+N E+ I
Sbjct:   42 KSTLANALDRKLFEEGIHSYVLDGDNIRHGLNAGLGFSEEDRKENIRRIGEVAKLFVDAGVVTSTAFISPFREDRDNVRGILDDGEFIEVYVRCPLETCEKRDPKGLYKKARSGDIPEFTGISSPYEEPVNPELII 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_STACT (Adenylyl-sulfate kinase OS=Staphylococcus carnosus (strain TM300) GN=cysC PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.339e-41
Identity = 84/160 (52.50%), Postives = 110/160 (68.75%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEE 481
            KST++ ++ K L+ RG  SY LDGDN+RHGLN NL FS EDR ENIRR+GEV+KL +DAGLI + + ISPYR+DRD  R +L D  F+EV+    +  CE RDPK LYK  RAG+IK FTGID PYE P + EI +  ++    +      Q++ YLE++
Sbjct:   40 KSTISVALEKALFERGVRSYRLDGDNIRHGLNNNLGFSPEDRKENIRRIGEVSKLLSDAGLITLTAFISPYREDRDHVREILEDGEFVEVYTKASVAACEERDPKQLYKKVRAGEIKNFTGIDAPYEAPEDPEIIVDTEEN---SVEEAVEQIIQYLEDQ 196          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_MARAV (Adenylyl-sulfate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=cysC PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.339e-41
Identity = 87/159 (54.72%), Postives = 113/159 (71.07%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEE 478
            KST+A +++  L+ RG  +++LDGDN+RHGL  +L FS +DR ENIRRVGEV KLFADAGLI +++ ISP+  DR   R + P   FIEVFM+ PLE CE+RDPKGLYK ARAG+IK FTGID PYE P + EI +   D    T +     +++YL+E
Sbjct:   37 KSTIANALDVALHERGYHTFLLDGDNVRHGLCSDLGFSDDDRVENIRRVGEVCKLFADAGLIVMSAFISPFTSDRRMVRKLFPAGEFIEVFMDAPLETCESRDPKGLYKKARAGEIKHFTGIDSPYEVPSHPEIRL---DTSQSTVDECVDSLIAYLQE 192          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_CLOAB (Adenylyl-sulfate kinase OS=Clostridium acetobutylicum GN=cysC PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.749e-41
Identity = 87/164 (53.05%), Postives = 117/164 (71.34%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK-QKDGVCPTPNAMAGQVVSYLEEEGYL 490
            KST+A ++ K+LY  G L+Y+LDGDNLR+GLN +L F +EDRTENIRRV EVAKLFADAG+I I + ISP+ +DR+  R +L   +F+EV+++ P+E+CE RDPKG+YK AR G+IK FTGID PYE P   EI ++  KD    T       ++ YL++   L
Sbjct:   42 KSTVASALEKKLYEMGYLTYLLDGDNLRYGLNSDLGFKSEDRTENIRRVSEVAKLFADAGIITITTFISPFIEDRNNARKLL-GKDFVEVYIDCPIEVCEKRDPKGIYKKARNGEIKNFTGIDSPYEKPEKPEITVETYKD----TEEKCVDNIIEYLKQHKIL 200          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC2_BACSU (Probable adenylyl-sulfate kinase OS=Bacillus subtilis GN=yisZ PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.284e-41
Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            KS LA +V+++LY +G  SY+LDGDN+RHGLNK+L F   DR ENIRR+GEVAKLF D+G + + + ISP+R+DRD  RA+ P   F E+++  PL +CE RDPKGLYK AR G+IK FTGID PYE PL+ +  I+
Sbjct:   40 KSVLANAVDEKLYRKGIQSYVLDGDNIRHGLNKDLGFQTGDRIENIRRIGEVAKLFVDSGQMILTAFISPFREDRDMVRALFPKGEFFEIYVKCPLHVCEQRDPKGLYKKARNGEIKHFTGIDSPYEAPLSPDFIIE 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_CLOK5 (Adenylyl-sulfate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=cysC PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.481e-40
Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A  +   LY+ G+L+Y+LDGDN+RHGLN NL F+ EDR ENIRR  EV KLF D+G+I I++ ISP++ DRD  R +L   +F+EV+++ PLE+CE+RDPKG+YK AR G+IK FTG+D PYE P N EI +
Sbjct:   41 KSTIASELEMRLYNMGRLTYLLDGDNVRHGLNSNLGFTKEDRIENIRRTAEVCKLFVDSGIITISTFISPFKDDRDKVRKLL-GKDFVEVYVDCPLEVCESRDPKGIYKKARNGEIKDFTGVDSPYEVPDNPEIVV 175          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFT (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysNC PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.934e-40
Identity = 84/161 (52.17%), Postives = 110/161 (68.32%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEG 484
            KS +A  V+K L++ G  ++ILDGDN+RHGLN++L F+ EDR ENIRRV EVA+L  DAGL+ + S ISP+R +R   R       F+EVF+++PL + EARD KGLY  ARAG I  FTGID PYEPP + E+ ++   G   TP  +A QV+S L  EG
Sbjct:  465 KSAIANIVDKRLHALGYHTFILDGDNVRHGLNRDLSFTVEDRVENIRRVAEVARLMVDAGLVVLVSFISPFRDERQLARERFAADEFVEVFVDVPLAVAEARDVKGLYAKARAGLITDFTGIDSPYEPPQHPELHLRADQG---TPEQLASQVLSLLGVEG 622          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFA (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa GN=cysNC PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.299e-40
Identity = 83/160 (51.88%), Postives = 111/160 (69.38%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEE 481
            KS +A  V+K L++ G  ++ILDGDN+RHGLN++L F+ EDR ENIRRV EVA+L  DAGL+ + S ISP+R +R   R     + F+EVF+++PL + EARD KGLY  ARAG I  FTGID PYEPP + E+ ++   G   TP  +A QV+S+L  E
Sbjct:  465 KSAIANIVDKRLHALGYHTFILDGDNVRHGLNRDLSFTVEDRVENIRRVAEVARLMVDAGLVVLVSFISPFRDERQLARERFAANEFVEVFVDVPLAVAEARDVKGLYAKARAGLITDFTGIDSPYEPPPHPELHLRADQG---TPEQLASQVLSFLGVE 621          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_GEOUR (Adenylyl-sulfate kinase OS=Geobacter uraniireducens (strain Rf4) GN=cysC PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.299e-40
Identity = 77/136 (56.62%), Postives = 102/136 (75.00%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KSTLA +  + L+ +G  +YILDGDN+RHGLN +L FS  DR ENIRR+GEVAKLF DAG++ +A+ ISPY++DRD  RA+   + FIE+++   L+ CE+RDPKGLY+ ARAG++  FTGID PYE P   E+ I
Sbjct:   41 KSTLAHAAEEALFKKGCYTYILDGDNMRHGLNSDLGFSEADRRENIRRIGEVAKLFVDAGIVVLAAFISPYQEDRDRVRALFEPAEFIEIYVKCDLDTCESRDPKGLYRKARAGQLPQFTGIDSPYEEPQAPELVI 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_VIBVY (Adenylyl-sulfate kinase OS=Vibrio vulnificus (strain YJ016) GN=cysC PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.627e-40
Identity = 80/136 (58.82%), Postives = 102/136 (75.00%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++   L  +G  +Y+LDGDN+RHGL  +L FS +DR ENIRR+GE+AKL ADAGLI + + ISP+R +R   R +LP+  FIEVF+N  LE+CE RDPKGLYK ARAG+I  FTGID  YE PLN EI++
Sbjct:   45 KSTVAGALENRLAEQGFHTYLLDGDNVRHGLCSDLGFSTQDRRENIRRIGELAKLMADAGLIVLTAFISPHRAERQLVRDLLPEGEFIEVFVNTSLEVCEQRDPKGLYKKARAGEIANFTGIDSEYEVPLNPEIDL 180          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC1_BACHD7.851e-4260.29Probable adenylyl-sulfate kinase OS=Bacillus halod... [more]
CYSC_STACT1.339e-4152.50Adenylyl-sulfate kinase OS=Staphylococcus carnosus... [more]
CYSC_MARAV1.339e-4154.72Adenylyl-sulfate kinase OS=Marinobacter aquaeolei ... [more]
CYSC_CLOAB1.749e-4153.05Adenylyl-sulfate kinase OS=Clostridium acetobutyli... [more]
CYSC2_BACSU2.284e-4157.66Probable adenylyl-sulfate kinase OS=Bacillus subti... [more]
CYSC_CLOK51.481e-4057.35Adenylyl-sulfate kinase OS=Clostridium kluyveri (s... [more]
CYSNC_XYLFT1.934e-4052.17Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSNC_XYLFA3.299e-4051.88Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
CYSC_GEOUR3.299e-4056.62Adenylyl-sulfate kinase OS=Geobacter uraniireducen... [more]
CYSC_VIBVY5.627e-4058.82Adenylyl-sulfate kinase OS=Vibrio vulnificus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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