CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALNS (Adenylyl-sulfate kinase OS=Salmonella newport (strain SL254) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALHS (Adenylyl-sulfate kinase OS=Salmonella heidelberg (strain SL476) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALEP (Adenylyl-sulfate kinase OS=Salmonella enteritidis PT4 (strain P125109) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALDC (Adenylyl-sulfate kinase OS=Salmonella dublin (strain CT_02021853) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALA4 (Adenylyl-sulfate kinase OS=Salmonella agona (strain SL483) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOLC (Adenylyl-sulfate kinase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALPC (Adenylyl-sulfate kinase OS=Salmonella paratyphi C (strain RKS4594) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.098e-35
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALCH (Adenylyl-sulfate kinase OS=Salmonella choleraesuis GN=cysC PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.098e-35
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_BACLD (Adenylyl-sulfate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.098e-35
Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEE 481
            KST+A +  +EL+++G    +LDGDN+RHGLNK+L FS EDR ENIRR+GEVAKLF + G I I + ISP+++DR   R ++ +  F EV++   L  CE RDPKGLYK AR G+I  FTGID PYE P   E+ +   D           Q+V Y++++
Sbjct:   39 KSTIANAAARELFAQGYQVTVLDGDNVRHGLNKDLGFSDEDRKENIRRIGEVAKLFVEQGTIVITAFISPFKEDRGLVRQLVEEDEFHEVYVKCDLATCEERDPKGLYKKARNGEIPFFTGIDSPYEEPETPELVL---DTGAHNREECKNQLVQYVKDQ 195          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHIFL (Adenylyl-sulfate kinase OS=Shigella flexneri GN=cysC PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.873e-35
Identity = 72/136 (52.94%), Postives = 97/136 (71.32%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+     +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLSVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_SALNS8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella newport (str... [more]
CYSC_SALHS8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella heidelberg (... [more]
CYSC_SALEP8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella enteritidis ... [more]
CYSC_SALDC8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella dublin (stra... [more]
CYSC_SALA48.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella agona (strai... [more]
CYSC_ECOLC8.408e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli (strai... [more]
CYSC_SALPC1.098e-3552.94Adenylyl-sulfate kinase OS=Salmonella paratyphi C ... [more]
CYSC_SALCH1.098e-3552.94Adenylyl-sulfate kinase OS=Salmonella choleraesuis... [more]
CYSC_BACLD1.098e-3548.13Adenylyl-sulfate kinase OS=Bacillus licheniformis ... [more]
CYSC_SHIFL1.873e-3552.94Adenylyl-sulfate kinase OS=Shigella flexneri GN=cy... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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