CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SYNP2 (Adenylyl-sulfate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cysC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.620e-32
Identity = 72/137 (52.55%), Postives = 93/137 (67.88%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            K+T++ ++ + L + G    ILDGD +R  L K L FS EDR ENIRR+G V+ L    G+I   S ISPYR+ R+  R  + D  F+E+F+N PLE CE RD KGLY+ ARAG+IKGFTGIDDPYE P N E+E +
Sbjct:   18 KTTISHALAERLKAAGCKLEILDGDIVRTNLTKGLGFSKEDRDENIRRIGFVSHLLTRNGVIVFVSAISPYREIREEVRQRIGD--FVEIFVNAPLEECERRDVKGLYQRARAGEIKGFTGIDDPYEAPTNPEVECR 152          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_BURXL (Adenylyl-sulfate kinase OS=Burkholderia xenovorans (strain LB400) GN=cysC PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.256e-31
Identity = 70/137 (51.09%), Postives = 95/137 (69.34%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            KSTLA +++  L   G+ + +LDGD LR GLN +L F+ EDRTEN+RRV  VA LF   G + IA++ISP  + R A R ++ +  F+EVF+N PL++CEARD KGLY  AR G+I  FTGI DP+E PL  ++ I+
Sbjct:   19 KSTLANALHLRLKEAGQAAIVLDGDVLRRGLNADLGFTPEDRTENLRRVAHVAALFMQQGFVVIAAVISPEHRHRRAAREIVGE-GFVEVFVNAPLQVCEARDAKGLYARARRGEIAHFTGISDPFEAPLAADLVIE 154          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSNC_MYCTU (Bifunctional enzyme cysN/cysC OS=Mycobacterium tuberculosis GN=cysNC PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.235e-31
Identity = 72/160 (45.00%), Postives = 99/160 (61.88%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDS--NFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLE 475
            KS++A  V ++L  +G  +Y+LDGDNLRHGLN +L FS  DR EN+RR+  VA L AD G + +   ISP  + R   R +  D+  +F EVF + PL+ CE RDPKGLY  ARAG+I  FTGID PY+ P N ++ +     +    +  A +V+  LE
Sbjct:  456 KSSVAMLVERKLLEKGISAYVLDGDNLRHGLNADLGFSMADRAENLRRLSHVATLLADCGHLVLVPAISPLAEHRALARKVHADAGIDFFEVFCDTPLQDCERRDPKGLYAKARAGEITHFTGIDSPYQRPKNPDLRLTPDRSI----DEQAQEVIDLLE 611          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_BUCAP (Adenylyl-sulfate kinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysC PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.235e-31
Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQ 415
            KS++A S+ + L+     +Y+LDGDN+R  L  +L FS  DR ENIRR+GEV+KL  DAG+I + S+ISPYR  R   R ML   NF+EVF++ PL +CE RDPK LY+ +R GKI   TGI   YE P   ++ + +
Sbjct:   42 KSSIANSLEEILFQNNFNTYLLDGDNIRSSLCSDLSFSILDRNENIRRIGEVSKLMIDAGIIVLVSVISPYRNQRKKIRLMLGKINFLEVFVDTPLNICEERDPKKLYQKSRLGKISDLTGIQSLYEIPEKPDLHLDE 179          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SYNJA (Adenylyl-sulfate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=cysC PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.389e-30
Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQ----VVSYLEEEGYL 490
            K+TL+  V ++L + G    +LDGD +R  L+K L FS  DR EN+RR+G VA++    G+I + S ISPYR  R   R  +   NFIEVF++ PLE+CE RD KGLY+ ARAG I+ FTGIDDPYEPP   E+       VC T      +    V+  L   GYL
Sbjct:   18 KTTLSCGVAQQLQALGLPVEVLDGDLVRQHLSKELGFSRADRDENVRRIGFVAEMLTRHGVIVLVSAISPYRATRQEVRQQI--GNFIEVFVDAPLEVCEQRDVKGLYRKARAGLIRHFTGIDDPYEPPEYPEV-------VCKTAEQSISECIDLVMQSLRSHGYL 175          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_BURPP (Adenylyl-sulfate kinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=cysC PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.389e-30
Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            KSTLA ++++ L   G  + +LDGD LR GLN +L F+ EDRTEN+RR+  VA LF   G + IA++ISP  + R + R ++ D  FIEVF+N PL +CEARD KGLY  AR G+I  FTGI  P+E PL  ++ I+
Sbjct:   19 KSTLANALHQRLMEAGHAAIVLDGDVLRRGLNADLGFTPEDRTENLRRIAHVAALFMQQGFVVIAAVISPEHRHRCSAREIVGD-GFIEVFVNAPLNVCEARDAKGLYARARRGEIPHFTGISGPFEAPLAPDVVIE 154          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SYNY3 (Probable adenylyl-sulfate kinase OS=Synechocystis sp. (strain PCC 6803) GN=cysC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.279e-30
Identity = 68/137 (49.64%), Postives = 89/137 (64.96%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            K+T+  ++ K+L   G    +LDGD +R  L K L FS EDR  NIRR+G V+ L    G+I + S ISPY   R   +  + D  F+EVF+N PL +CE RD KGLY  AR+G+IKGFTGIDDPYEPP N ++E +
Sbjct:   18 KTTITHALEKKLRDSGYRLEVLDGDVVRTNLTKGLGFSKEDRDTNIRRIGFVSHLLTRNGVIVLVSAISPYAAIRQEVKHTIGD--FLEVFVNAPLAVCEERDVKGLYAKARSGEIKGFTGIDDPYEPPTNPDVECR 152          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: SATC1_SORC5 (Probable bifunctional SAT/APS kinase 1 OS=Sorangium cellulosum (strain So ce56) GN=sat1/cysC1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.894e-30
Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEGYL 490
            KSTLA  +  EL  RG     LDGD +R  L+K L FS EDR  NIRR+G VA+L A +G   I + ISPYR+ RD  R  +    F EV+   PL++ E RD KGLY  ARAG+IKGFTG+DDPYEPP + E+ +        +P     ++++ LEE GY+
Sbjct:   19 KSTLAAMLAAELPRRGVHVESLDGDVVRTHLSKGLGFSREDRDTNIRRIGFVARLVARSGACAITAAISPYREIRDEQRRAI--GRFCEVYCECPLDVLERRDIKGLYARARAGEIKGFTGVDDPYEPPRSPEVIVHTDR---ESPREGLARILAKLEELGYV 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: SATC2_SORC5 (Probable bifunctional SAT/APS kinase 2 OS=Sorangium cellulosum (strain So ce56) GN=sat2/cysC2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.004e-30
Identity = 75/163 (46.01%), Postives = 101/163 (61.96%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEGYL 490
            KSTLA  ++ EL +R     +LDGD +R  L+K L FS EDR  NIRR+G VAKL A +G   + + ISPY+  RD  RA +P  +F+EVF +  + +   RD KGLYK A AG+IK FTGIDDPYE P + E+ +   D    T      ++++ LEE GY+
Sbjct:   16 KSTLAAMLSAELRARSVHVEVLDGDEVRTNLSKGLGFSKEDRDTNIRRIGYVAKLIARSGACAMTAAISPYKAIRDEQRAQIP--HFVEVFCSCEIPVLAERDAKGLYKKALAGEIKNFTGIDDPYEAPESPEVVV---DTGKETKEESLAKILAKLEELGYV 173          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SYNJB (Adenylyl-sulfate kinase OS=Synechococcus sp. GN=cysC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.004e-30
Identity = 75/163 (46.01%), Postives = 99/163 (60.74%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEGYL 490
            K+TL+  V ++L + G    +LDGD +R  L K L FS  DR ENIRR+G VA++    G+I + S ISPYR  R   R  +   +FIEVF++ PLE+CE RD KGLY+ ARAG I+ FTGIDDPYEPP   E+  K  +   P        V+  L+  GY+
Sbjct:   18 KTTLSCGVAQQLRAWGLPVEVLDGDLVRQHLTKGLGFSKVDREENIRRIGFVAEMLTRHGVIVLVSAISPYRAARQEVRRYI--GSFIEVFVDAPLEVCERRDVKGLYRKARAGLIQHFTGIDDPYEPPEQPEVVCKTAEQSIP---ECIDLVIQSLKSRGYV 175          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_SYNP29.620e-3252.55Adenylyl-sulfate kinase OS=Synechococcus sp. (stra... [more]
CYSC_BURXL1.256e-3151.09Adenylyl-sulfate kinase OS=Burkholderia xenovorans... [more]
CYSNC_MYCTU6.235e-3145.00Bifunctional enzyme cysN/cysC OS=Mycobacterium tub... [more]
CYSC_BUCAP6.235e-3148.55Adenylyl-sulfate kinase OS=Buchnera aphidicola sub... [more]
CYSC_SYNJA1.389e-3046.11Adenylyl-sulfate kinase OS=Synechococcus sp. (stra... [more]
CYSC_BURPP1.389e-3050.36Adenylyl-sulfate kinase OS=Burkholderia phytofirma... [more]
CYSC_SYNY35.279e-3049.64Probable adenylyl-sulfate kinase OS=Synechocystis ... [more]
SATC1_SORC56.894e-3047.24Probable bifunctional SAT/APS kinase 1 OS=Sorangiu... [more]
SATC2_SORC59.004e-3046.01Probable bifunctional SAT/APS kinase 2 OS=Sorangiu... [more]
CYSC_SYNJB9.004e-3046.01Adenylyl-sulfate kinase OS=Synechococcus sp. GN=cy... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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