CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_VIBVU (Adenylyl-sulfate kinase OS=Vibrio vulnificus GN=cysC PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.627e-40
Identity = 80/136 (58.82%), Postives = 102/136 (75.00%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++   L  +G  +Y+LDGDN+RHGL  +L FS +DR ENIRR+GE+AKL ADAGLI + + ISP+R +R   R +LP+  FIEVF+N  LE+CE RDPKGLYK ARAG+I  FTGID  YE PLN EI++
Sbjct:   45 KSTVAGALENRLAEQGFHTYLLDGDNVRHGLCSDLGFSTQDRRENIRRIGELAKLMADAGLIVLTAFISPHRAERQLVRDLLPEGEFIEVFVNTSLEVCEQRDPKGLYKKARAGEIANFTGIDSEYEVPLNPEIDL 180          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_PSEE4 (Adenylyl-sulfate kinase OS=Pseudomonas entomophila (strain L48) GN=cysC PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.627e-40
Identity = 84/161 (52.17%), Postives = 109/161 (67.70%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEG 484
            KST+A +++  L+ RG  +Y+LDGDN+R GLNK+L FS +DR ENIRRVGEVAKLF DAGLI   + ISPY KDR   R +L +  ++EVF++  L  CE RDPKGLY+ ARAG++  FTGID PYEPP+   +     D    T N + G +  YL  +G
Sbjct:   37 KSTIANALDGWLHRRGCHTYVLDGDNVRQGLNKDLGFSEQDRVENIRRVGEVAKLFNDAGLIVSCAFISPYEKDRHLVRQLLNEDEYVEVFLSTSLADCERRDPKGLYRKARAGELANFTGIDSPYEPPVRPNLAF---DTSTHTVNEVVGAIFDYLVAKG 194          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ACAM1 (Adenylyl-sulfate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=cysC PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.349e-40
Identity = 81/161 (50.31%), Postives = 111/161 (68.94%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEG 484
            KSTLA +V   L      ++++DGDN+RHGL  +L FS+EDR ENIRR+GEVAKLF +AG+I +++ ISP+R DRD  R ++P+ +FIE++    LE+CE RD KGLYK AR+G+I  FTGI  PYEPP   EI +K  +    +    A QV+ +L+E G
Sbjct:   41 KSTLAHTVEDALSKMNCRTFVIDGDNIRHGLCADLGFSSEDRVENIRRIGEVAKLFTEAGIIVLSAFISPFRADRDRVRELVPEGDFIEIYCQASLEVCEERDVKGLYKKARSGEIPNFTGISSPYEPPEEPEIIVKTGE---DSLEVCAQQVIEFLQERG 198          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: PAPSS_URECA (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase OS=Urechis caupo PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 9.597e-40
Identity = 83/163 (50.92%), Postives = 116/163 (71.17%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSN--FIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEG 484
            K+T++F++ + L S+G  +Y LDGDN+RHGLNKNL F+ EDR ENIRR+ EVAKLFAD G++C+ S ISP+++DRD  R++   +   F E F++ PL++CE RD KGLYK ARAG+IKGFTGID  YE P   EI++   +    + +    +VVS L++ G
Sbjct:   50 KTTISFALEEYLVSQGIPTYSLDGDNVRHGLNKNLGFTQEDREENIRRISEVAKLFADGGIVCLTSFISPFKRDRDLARSLHEQAGLPFFECFVDTPLDVCEQRDVKGLYKKARAGQIKGFTGIDQQYESPDAPEIQLYAGN---KSIDECVQEVVSLLQKNG 209          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEPA (Adenylyl-sulfate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=cysC PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.253e-39
Identity = 79/141 (56.03%), Postives = 103/141 (73.05%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FSA+DR EN+RRVGEVAKL  DAGL+ +++ ISP R++R+  RA+     FIEV ++ P+E+CEARDPKGLY  ARAG+IK FTGI  PYE P   E+ I    G
Sbjct:   37 KSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSADDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERERVRALFDQGQFIEVHVSTPIEVCEARDPKGLYSKARAGEIKNFTGISAPYETPTAAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEB5 (Adenylyl-sulfate kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=cysC PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.637e-39
Identity = 79/141 (56.03%), Postives = 102/141 (72.34%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L F+ EDR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P S FIEV ++ PL +CE RDPKGLY  AR+G+I  FTGI  PYE PL  E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPTSQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_VIBPA (Adenylyl-sulfate kinase OS=Vibrio parahaemolyticus GN=cysC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.138e-39
Identity = 78/136 (57.35%), Postives = 102/136 (75.00%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++   L   G  +Y+LDGDN+RHGL  +L FS +DR ENIRR+GE+AKL ADAGLI +++ ISP+R +R   R +LP+  FIEVF+N  LE+CE RDPKGLYK ARAG+I  FTGID  Y+ P+N EI++
Sbjct:   45 KSTVAGALENRLAELGYHTYLLDGDNVRHGLCSDLGFSEQDRRENIRRIGELAKLMADAGLIVLSAFISPHRAERQLVRDLLPEGEFIEVFVNASLEVCEGRDPKGLYKKARAGEIPNFTGIDSEYQAPINPEIDL 180          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEB8 (Adenylyl-sulfate kinase OS=Shewanella baltica (strain OS185) GN=cysC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.138e-39
Identity = 79/141 (56.03%), Postives = 102/141 (72.34%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L F+ EDR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P S FIEV ++ PL +CE RDPKGLY  AR+G+I  FTGI  PYE PL  E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPASQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEB2 (Adenylyl-sulfate kinase OS=Shewanella baltica (strain OS223) GN=cysC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.138e-39
Identity = 79/141 (56.03%), Postives = 102/141 (72.34%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L F+ EDR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P S FIEV ++ PL +CE RDPKGLY  AR+G+I  FTGI  PYE PL  E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPASQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHESR (Adenylyl-sulfate kinase OS=Shewanella sp. (strain MR-7) GN=cysC PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.792e-39
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS  DR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P+  FIEV ++ PL +CE RDPKGLY  AR G+I  FTGI  PYE PL+ E+ I    G
Sbjct:   37 KSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSVADRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPEGQFIEVHVSTPLSICEQRDPKGLYVKARRGEISNFTGISSPYEAPLSAELTIDTSKG 177          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_VIBVU5.627e-4058.82Adenylyl-sulfate kinase OS=Vibrio vulnificus GN=cy... [more]
CYSC_PSEE45.627e-4052.17Adenylyl-sulfate kinase OS=Pseudomonas entomophila... [more]
CYSC_ACAM17.349e-4050.31Adenylyl-sulfate kinase OS=Acaryochloris marina (s... [more]
PAPSS_URECA9.597e-4050.92Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
CYSC_SHEPA1.253e-3956.03Adenylyl-sulfate kinase OS=Shewanella pealeana (st... [more]
CYSC_SHEB51.637e-3956.03Adenylyl-sulfate kinase OS=Shewanella baltica (str... [more]
CYSC_VIBPA2.138e-3957.35Adenylyl-sulfate kinase OS=Vibrio parahaemolyticus... [more]
CYSC_SHEB82.138e-3956.03Adenylyl-sulfate kinase OS=Shewanella baltica (str... [more]
CYSC_SHEB22.138e-3956.03Adenylyl-sulfate kinase OS=Shewanella baltica (str... [more]
CYSC_SHESR2.792e-3955.32Adenylyl-sulfate kinase OS=Shewanella sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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