CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHESA (Adenylyl-sulfate kinase OS=Shewanella sp. (strain ANA-3) GN=cysC PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.792e-39
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS  DR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P+  FIEV ++ PL +CE RDPKGLY  AR G+I  FTGI  PYE PL+ E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFSVADRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPEGQFIEVHVSTPLSICEQRDPKGLYVKARRGEISNFTGISSPYEAPLSAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEB9 (Adenylyl-sulfate kinase OS=Shewanella baltica (strain OS195) GN=cysC PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.792e-39
Identity = 79/141 (56.03%), Postives = 102/141 (72.34%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L F+ EDR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P S FIEV ++ PL +CE RDPKGLY  AR+G+I  FTGI  PYE PL  E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPVSQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEDO (Adenylyl-sulfate kinase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=cysC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.647e-39
Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS  DR EN+RRVGEVAKL  DAGL+ +++ ISP R +RD  RA+ P+  FIEV ++ PL +CEARDPKGLY  AR+G+IK FTGI  PYE P   E+ I    G
Sbjct:   37 KSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSLSDRDENLRRVGEVAKLMVDAGLVVLSAFISPTRAERDRVRALFPEGRFIEVHVSTPLSVCEARDPKGLYVKARSGEIKEFTGISSPYEAPTAAELTIDTSRG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: PAPS2_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.763e-39
Identity = 85/162 (52.47%), Postives = 110/162 (67.90%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSN--FIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEE 481
            K+T++F++ + L S     Y LDGDN+RHGLNKNL FSA DR ENIRR+ EVA+LFADAGL+CI S ISP+ KDR+  R +   +   F E+F++ PL +CE+RD KGLYK ARAG+IKGFTGID  YE P   E  +K       + +    QVV  L+E+
Sbjct:   56 KTTISFALEEYLVSHAIPCYSLDGDNVRHGLNKNLGFSAGDREENIRRIAEVARLFADAGLVCITSFISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPECVLKTN---LSSVSDCVQQVVELLQEQ 214          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_YERPE (Adenylyl-sulfate kinase OS=Yersinia pestis GN=cysC PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.763e-39
Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            KSTLA ++ + L++RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVAKL  DAGL+ + + ISP+R +R   + ML    FIEVF++ PL +CEARDPKGLYK ARAG++K FTGID  YE P + +I ++
Sbjct:   53 KSTLAGALEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYESPASPDIHLQ 189          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_STAHJ (Adenylyl-sulfate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysC PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.763e-39
Identity = 82/136 (60.29%), Postives = 95/136 (69.85%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST++  + K L+   K SY LDGDN+RHGLNKNL FS EDR ENIRR+GEV+KL  DAG I I + ISPYR DRD  R +L D  FIEV+    +E CE RDPKGLYK AR+G+IK FTGI   YE P   EI I
Sbjct:   40 KSTVSVELEKALFQLEKHSYRLDGDNVRHGLNKNLGFSPEDRKENIRRIGEVSKLLVDAGTIAITAFISPYRADRDEVREILEDGEFIEVYTECSVEACEQRDPKGLYKKARSGEIKEFTGISASYEAPHQPEITI 175          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHESM (Adenylyl-sulfate kinase OS=Shewanella sp. (strain MR-4) GN=cysC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.221e-39
Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS  DR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P   FIEV ++ PL +CE RDPKGLY  AR G+I  FTGI  PYE PL+ E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFSVADRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPTGQFIEVHVSTPLSICEQRDPKGLYVKARRGEISNFTGISSPYEAPLSAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: PAPS2_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Homo sapiens GN=PAPSS2 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSN--FIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEGYLHF 496
            K+T++F++ + L S     Y LDGDN+RHGLN+NL FS  DR ENIRR+ EVAKLFADAGL+CI S ISP+ KDR+  R +   +   F E+F++ PL +CE+RD KGLYK ARAG+IKGFTGID  YE P   E  +K       T +    QVV  L+E+  + +
Sbjct:   55 KTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITSFISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPERVLKTN---LSTVSDCVHQVVELLQEQNIVPY 218          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_VIBCH (Adenylyl-sulfate kinase OS=Vibrio cholerae GN=cysC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39
Identity = 76/136 (55.88%), Postives = 104/136 (76.47%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++   L + G  +Y+LDGDN+RHGL  +L FS +DR ENIRR+GE+AKL +DAGLI + + ISP+R +R   R +LP+  F+EV++N  L++CEARDPKGLYK ARAG+I+ FTGID  YE PLN +I++
Sbjct:   52 KSTVAGALENRLAALGYHTYLLDGDNVRHGLCSDLGFSEQDRRENIRRIGELAKLMSDAGLIVLTAFISPHRAERQMVRDLLPNGEFLEVYVNTSLDVCEARDPKGLYKKARAGEIRQFTGIDSAYEAPLNPDIDL 187          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHESW (Adenylyl-sulfate kinase OS=Shewanella sp. (strain W3-18-1) GN=cysC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39
Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L F+ EDR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD  RA  P   FIEV ++ PL +CE RDPKGLY  AR+G+I  FTGI  PYE PL  E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPAGQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKG 177          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_SHESA2.792e-3955.32Adenylyl-sulfate kinase OS=Shewanella sp. (strain ... [more]
CYSC_SHEB92.792e-3956.03Adenylyl-sulfate kinase OS=Shewanella baltica (str... [more]
CYSC_SHEDO3.647e-3956.03Adenylyl-sulfate kinase OS=Shewanella denitrifican... [more]
PAPS2_MOUSE4.763e-3952.47Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
CYSC_YERPE4.763e-3956.93Adenylyl-sulfate kinase OS=Yersinia pestis GN=cysC... [more]
CYSC_STAHJ4.763e-3960.29Adenylyl-sulfate kinase OS=Staphylococcus haemolyt... [more]
CYSC_SHESM6.221e-3955.32Adenylyl-sulfate kinase OS=Shewanella sp. (strain ... [more]
PAPS2_HUMAN8.125e-3950.90Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
CYSC_VIBCH8.125e-3955.88Adenylyl-sulfate kinase OS=Vibrio cholerae GN=cysC... [more]
CYSC_SHESW8.125e-3955.32Adenylyl-sulfate kinase OS=Shewanella sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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