CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEPC (Adenylyl-sulfate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=cysC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39
Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L F+ EDR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD  RA  P   FIEV ++ PL +CE RDPKGLY  AR+G+I  FTGI  PYE PL  E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFTVEDRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDGIRARFPAGQFIEVHVSTPLSVCEQRDPKGLYVKARSGEISNFTGISSPYEAPLAAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEON (Adenylyl-sulfate kinase OS=Shewanella oneidensis GN=cysC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.125e-39
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS  DR EN+RRVGEVAKL  DAGL+ +++ ISP R++RD+ RA  P+  FIEV ++ PL +CE RDPKGLY  AR G+I  FTGI  PYE PL+ E+ I    G
Sbjct:   37 KSTLAGALERALFEAGFHTYLLDGDNVRHGLCKDLGFSVADRDENLRRVGEVAKLMVDAGLVVLSAFISPTREERDSIRARFPEGQFIEVHVSTPLSVCELRDPKGLYVKARKGEIAHFTGISSPYEAPLSAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: NODQ_RHISB (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain BR816) GN=nodQ PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38
Identity = 80/158 (50.63%), Postives = 113/158 (71.52%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLE 475
            KST+A ++++ L++RGK +Y+LDGDN+RHGLN++L F+  DR ENIRRV EVAKL ADAGLI + S ISP+R +R   R ++ +  FIE+F++ PLE C  RDPK LY+ A AGKI  FTG+  PYE P + E+ +K    V   P A+A ++ ++L+
Sbjct:  473 KSTIANALDRLLHARGKHTYMLDGDNVRHGLNRDLGFTEADRVENIRRVAEVAKLMADAGLIVLVSFISPFRGERRMARELMEEGEFIEIFVDTPLEECARRDPKALYEKALAGKIANFTGVSSPYEAPESPELHLKT---VEEDPVALALKIEAFLD 627          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: NODQ_RHIME (Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=nodQ PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38
Identity = 80/158 (50.63%), Postives = 111/158 (70.25%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLE 475
            KST+A  +++ L+++GK +Y+LDGDN+RHGLN++L F+ EDR ENIRRV EVAKL ADAGLI + S ISP+R +R   R ++ +  FIE+F++ PL+ C  RDPKGLY+ A AGKI  FTG+   YE P N E+ I+    V   PN +A  +  +L+
Sbjct:  473 KSTIANELDRILHAQGKHTYLLDGDNVRHGLNRDLGFTEEDRVENIRRVAEVAKLMADAGLIVLVSFISPFRDERRMARELMEEGEFIEIFVDTPLDECARRDPKGLYEKALAGKIANFTGVSSCYEAPENPELHIRT---VGHQPNDLALAIEEFLD 627          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEFN (Adenylyl-sulfate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=cysC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38
Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS EDR EN+RRVGEVAKL  D+GL+ +++ ISP R++RD  RA+ P   F+EV ++ PL +CE+RDPKGLY  AR G+I  FTGI  PYE P + E+ I    G
Sbjct:   37 KSTLAGALERALFEHGFHTYLLDGDNVRHGLCKDLGFSIEDRDENLRRVGEVAKLMVDSGLVVLSAFISPTREERDRVRALFPQGQFVEVHVSTPLSVCESRDPKGLYAKARKGEITNFTGISSPYEVPESAELTIDTSKG 177          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_KLEP7 (Adenylyl-sulfate kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=cysC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38
Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL  +L FS EDR ENIRRVGEVA+L  DAGL+ + + ISP+R +R   R  L +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P   EI +
Sbjct:   41 KSTVAGALEEALHERGVSTYLLDGDNVRHGLCSDLGFSDEDRKENIRRVGEVARLMVDAGLVVLTAFISPHRAERQMVRERLGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPEKAEIHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_KLEP3 (Adenylyl-sulfate kinase OS=Klebsiella pneumoniae (strain 342) GN=cysC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38
Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL  +L FS EDR ENIRRVGEVA+L  DAGL+ + + ISP+R +R   R  L +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P   EI +
Sbjct:   41 KSTVAGALEEALHERGVSTYLLDGDNVRHGLCSDLGFSDEDRKENIRRVGEVARLMVDAGLVVLTAFISPHRAERQMVRERLGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPEKAEIHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ERWT9 (Adenylyl-sulfate kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=cysC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38
Identity = 76/136 (55.88%), Postives = 103/136 (75.74%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  SY+LDGDN+RHGL ++L FS +DR ENIRRVGEVA+L  DAGL+ + + ISP+R +R   R ML +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  Y+ PL+ +I +
Sbjct:   41 KSTVAGALEQALHQLGVSSYLLDGDNVRHGLCRDLGFSDDDRKENIRRVGEVARLMVDAGLVVLTAFISPHRAERQMVRDMLGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDAEYQVPLHADIHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: PAPS1_CAVPO (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Cavia porcellus GN=PAPSS1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.364e-38
Identity = 89/164 (54.27%), Postives = 108/164 (65.85%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACR-----AMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEE 478
            K+T++ ++ + L   G   Y LDGDN+R GLNKNL FS EDR EN+RR+ EVAKLFADAGL+CI S ISPY +DR+  R     A LP   F EVF++ PL +CE RD KGLYK ARAG+IKGFTGID  YE P   E+ +  K   C   N    QVV  L+E
Sbjct:   65 KTTVSMALGEHLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLP---FFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVL--KTDACDV-NDCVQQVVELLQE 222          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SHEHH (Adenylyl-sulfate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=cysC PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.087e-38
Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDG 424
            KSTLA ++ + L+  G  +Y+LDGDN+RHGL K+L FS +DR EN+RRVGEVAKL  DAGL+ +++ ISP R +R+  RA+  D  FIEV ++ P+E+CEARDPKGLY  ARAG+IK FTGI   YE P   E+ I    G
Sbjct:   37 KSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSLDDRDENLRRVGEVAKLMVDAGLVVLSAFISPTRAERERVRALFDDGQFIEVHVSTPIEVCEARDPKGLYSKARAGEIKNFTGISASYEVPTAAELIIDTSKG 177          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_SHEPC8.125e-3955.32Adenylyl-sulfate kinase OS=Shewanella putrefaciens... [more]
CYSC_SHEON8.125e-3955.32Adenylyl-sulfate kinase OS=Shewanella oneidensis G... [more]
NODQ_RHISB1.386e-3850.63Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
NODQ_RHIME1.386e-3850.63Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=... [more]
CYSC_SHEFN1.386e-3853.90Adenylyl-sulfate kinase OS=Shewanella frigidimarin... [more]
CYSC_KLEP71.386e-3856.62Adenylyl-sulfate kinase OS=Klebsiella pneumoniae s... [more]
CYSC_KLEP31.386e-3856.62Adenylyl-sulfate kinase OS=Klebsiella pneumoniae (... [more]
CYSC_ERWT91.386e-3855.88Adenylyl-sulfate kinase OS=Erwinia tasmaniensis (s... [more]
PAPS1_CAVPO2.364e-3854.27Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
CYSC_SHEHH3.087e-3855.32Adenylyl-sulfate kinase OS=Shewanella halifaxensis... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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