CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: PAPS1_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Mus musculus GN=Papss1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38
Identity = 89/164 (54.27%), Postives = 108/164 (65.85%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACR-----AMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEE 478
            K+T++ ++ + L   G   Y LDGDN+R GLNKNL FS EDR EN+RR+ EVAKLFADAGL+CI S ISPY +DR+  R     A LP   F EVF++ PL +CE RD KGLYK ARAG+IKGFTGID  YE P   E+ +K     C   N    QVV  L+E
Sbjct:   65 KTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLP---FFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVLKTDS--CDV-NDCVQQVVELLQE 222          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: PAPS1_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Homo sapiens GN=PAPSS1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38
Identity = 89/164 (54.27%), Postives = 108/164 (65.85%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACR-----AMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEE 478
            K+T++ ++ + L   G   Y LDGDN+R GLNKNL FS EDR EN+RR+ EVAKLFADAGL+CI S ISPY +DR+  R     A LP   F EVF++ PL +CE RD KGLYK ARAG+IKGFTGID  YE P   E+ +K     C   N    QVV  L+E
Sbjct:   65 KTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLP---FFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEKPEAPELVLKTDS--CDV-NDCVQQVVELLQE 222          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: NODQ_RHITR (Bifunctional enzyme nodQ OS=Rhizobium tropici GN=nodQ PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38
Identity = 77/137 (56.20%), Postives = 100/137 (72.99%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            KST+A ++   L++ GK +Y+LDGDN+RHGLN++L F+A DR ENIRRV EVAKL ADAGLI I S ISP+R +R   R ++ +  FIE+F++ PL+ C  RDPKGLYK A AG I  FTG+  PYE P N E+ +K
Sbjct:  472 KSTIANALEALLHTCGKHTYLLDGDNVRHGLNRDLGFTAVDRVENIRRVAEVAKLMADAGLIVICSFISPFRDERRMARELMGEGEFIEIFVDTPLDECARRDPKGLYKKAFAGNIANFTGVSSPYEAPENPELHLK 608          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: NODQ_AZOBR (Bifunctional enzyme nodQ OS=Azospirillum brasilense GN=nodQ PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.032e-38
Identity = 80/161 (49.69%), Postives = 111/161 (68.94%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEG 484
            KST+A  V + L++ G  + +LDGDN+R GLN++L F+  DR ENIRRVGEVAKL  +AGLI + + I+P+R +R+A RA+LPD  F+EVF++ PL+ C  RDPKGLY  ARAG ++ FTG+D PYE P   E+ +   D      +A+A +VV  L  +G
Sbjct:  459 KSTIANRVERRLHTLGHHTMMLDGDNVRLGLNRDLGFTDADRVENIRRVGEVAKLMTEAGLIVLCAFIAPFRAEREAVRALLPDGAFLEVFVDTPLDECMRRDPKGLYAKARAGTLRNFTGVDSPYEAPDAPELRL---DTTAEDADALAERVVELLHRKG 616          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_THEYD (Adenylyl-sulfate kinase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=cysC PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.266e-38
Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A  V KELY RG  +Y+LDGDN+R+GL  +L FS E+R ENIRRVGE+ KLF DAG+I I S ISP+++DR+  R++  + +FIEV+   P+E C  RD KG+YK A  G+IK FTGI  PYE P N EI I
Sbjct:   41 KSTIAHLVEKELYKRGCSTYVLDGDNVRYGLCSDLGFSIEERKENIRRVGELVKLFVDAGIIVITSFISPFKEDREKVRSLFKEEDFIEVYTKCPVETCSLRDQKGIYKKAIKGEIKNFTGISAPYEEPENPEITI 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ENTS8 (Adenylyl-sulfate kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=cysC PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.266e-38
Identity = 84/160 (52.50%), Postives = 110/160 (68.75%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEE 481
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS +DR ENIRRVGEVAKL  DAGL+ + + ISP+R +R   R  L +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +   DG     N MA Q++  L  E
Sbjct:   41 KSTVAGALEEALHQLGVSTYLLDGDNVRHGLCSDLGFSDDDRKENIRRVGEVAKLMVDAGLVVLTAFISPHRAERQMVRDQLGEGRFIEVFVDTPLSVCEARDPKGLYKKARAGELRNFTGIDAVYEAPESPEIHL---DGQQLVTNLMA-QLLDLLRRE 196          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: KAPS_EMENI (Adenylyl-sulfate kinase OS=Emericella nidulans GN=sD PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 6.878e-38
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAM--LPDSN------FIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEGYL 490
            KST+A  +  +L  RG  +Y LDGDN+R GLNK+L FS  DR ENIRR+ EVAKLFAD+  I I S ISP+R DRD  R +  +P  N      F+EVF+++P+E+ E RDPKGLYK AR G IK FTGI  PYE P N E+ +K  D   P   A+  Q++ YL+ +  L
Sbjct:   37 KSTIAVELEHQLLQRGLHAYRLDGDNVRFGLNKDLGFSDADRNENIRRIAEVAKLFADSSSIAITSFISPFRADRDTARKLHEVPTPNDSTGLPFVEVFVDVPIEVAEKRDPKGLYKKAREGIIKEFTGISSPYEAPENPEVHVKNVD--LPIQEAVK-QIIDYLDSKKLL 204          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC2_BACHD (Probable adenylyl-sulfate kinase OS=Bacillus halodurans GN=BH3385 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.983e-38
Identity = 78/140 (55.71%), Postives = 97/140 (69.29%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKD 421
            KST+A +V  EL+ RG   Y+LDGDNLRHGLN +L FS EDR ENIRR  EV KLF DAGL+ +A+LISP  ++R   R+   +  F+EV+++  L+ CE RDPKGLYK AR G+I  FTGI  PYE P N +I I   D
Sbjct:   44 KSTIANAVQAELFKRGIQVYVLDGDNLRHGLNADLSFSMEDRKENIRRTAEVGKLFVDAGLVVLAALISPVEEERQRARSRFAEDEFLEVYVSCTLQECEKRDPKGLYKKARKGEIPQFTGIHQPYEEPKNPDICIDTTD 183          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: NODQ_RHIS3 (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain N33) GN=nodQ PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.173e-37
Identity = 76/137 (55.47%), Postives = 97/137 (70.80%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIK 412
            KST+A    K+L++ G+ +YILDGDN+RHGLN++L F+  DR ENIRRV EVA+L ADAGLI I S ISP+  +R   R ++ D  F+EVF++ P E C  RDPKGLY  A  G+IK FTG+D PYE P   EI +K
Sbjct:  476 KSTIANLFEKKLFATGRHTYILDGDNVRHGLNRDLGFTEADRVENIRRVAEVARLMADAGLIVIVSFISPFSAERRMARELMADGEFVEVFVDTPFEECARRDPKGLYARALNGEIKNFTGVDSPYEAPEKPEIHLK 612          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: KAPS_PENCH (Adenylyl-sulfate kinase OS=Penicillium chrysogenum PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.532e-37
Identity = 88/175 (50.29%), Postives = 114/175 (65.14%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKL-SYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAM-----------LPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEGYL 490
            KSTLA  +  +L    ++ +Y LDGDN+R GLNK+L FS  DR ENIRR+ EVAKLFAD+  I I S ISPYRKDRD  R +           LP   F+EV++++P+E+ E RDPKGLYK AR G IK FTGI  PYE P N E+ +K  +   P  +A+  Q++ YL+ +GYL
Sbjct:   38 KSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLP---FVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYE--LPVQDAVK-QIIDYLDTKGYL 206          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
PAPS1_MOUSE4.032e-3854.27Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_HUMAN4.032e-3854.27Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
NODQ_RHITR4.032e-3856.20Bifunctional enzyme nodQ OS=Rhizobium tropici GN=n... [more]
NODQ_AZOBR4.032e-3849.69Bifunctional enzyme nodQ OS=Azospirillum brasilens... [more]
CYSC_THEYD5.266e-3856.62Adenylyl-sulfate kinase OS=Thermodesulfovibrio yel... [more]
CYSC_ENTS85.266e-3852.50Adenylyl-sulfate kinase OS=Enterobacter sakazakii ... [more]
KAPS_EMENI6.878e-3850.88Adenylyl-sulfate kinase OS=Emericella nidulans GN=... [more]
CYSC2_BACHD8.983e-3855.71Probable adenylyl-sulfate kinase OS=Bacillus halod... [more]
NODQ_RHIS31.173e-3755.47Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
KAPS_PENCH1.532e-3750.29Adenylyl-sulfate kinase OS=Penicillium chrysogenum... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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