CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ESCF3 (Adenylyl-sulfate kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEINL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOUT (Adenylyl-sulfate kinase OS=Escherichia coli (strain UTI89 / UPEC) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOSM (Adenylyl-sulfate kinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOSE (Adenylyl-sulfate kinase OS=Escherichia coli (strain SE11) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOLU (Adenylyl-sulfate kinase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOLI (Adenylyl-sulfate kinase OS=Escherichia coli (strain K12) GN=cysC PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOL6 (Adenylyl-sulfate kinase OS=Escherichia coli O6 GN=cysC PE=3 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOK1 (Adenylyl-sulfate kinase OS=Escherichia coli O1:K1 / APEC GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOHS (Adenylyl-sulfate kinase OS=Escherichia coli O9:H4 (strain HS) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
[Close]
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECODH (Adenylyl-sulfate kinase OS=Escherichia coli (strain K12 / DH10B) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.774e-36
Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 2 
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_ESCF33.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia fergusonii ... [more]
CYSC_ECOUT3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli (strai... [more]
CYSC_ECOSM3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli (strai... [more]
CYSC_ECOSE3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli (strai... [more]
CYSC_ECOLU3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli O17:K5... [more]
CYSC_ECOLI3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli (strai... [more]
CYSC_ECOL63.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli O6 GN=... [more]
CYSC_ECOK13.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli O1:K1 ... [more]
CYSC_ECOHS3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli O9:H4 ... [more]
CYSC_ECODH3.774e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli (strai... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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