CX288906

Overview
NameCX288906
Unique NameCX288906
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length563
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_PSEAE (Adenylyl-sulfate kinase OS=Pseudomonas aeruginosa GN=cysC PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.929e-36
Identity = 78/158 (49.37%), Postives = 108/158 (68.35%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLE 475
            KST+A ++   L+ + K +++LDGD+LR GL +NL +S EDRTENIRR+ EVAK+  +AGLI I + ISP+ +DR   R ++   +FIEVF++ PL  CE RDPKGLY+ AR+GKI+ FTGID  YE P    I I   D +   P+    +++SYLE
Sbjct:   37 KSTIASALELALFEQKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSRELIGIEHFIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITI---DTLSEDPDLAVKRIISYLE 191          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_ECOL5 (Adenylyl-sulfate kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.929e-36
Identity = 73/136 (53.68%), Postives = 97/136 (71.32%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A  + + L+  G  +Y+LDGDN+RHGL  +L FS  DR ENIRRVGEVA L  +AGL+ + + ISP+R +R   R  + +  FIEVF++ PL +CEARDPKGLYK ARAG+++ FTGID  YE P + EI +
Sbjct:   41 KSTVAGGLEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_THEEB (Adenylyl-sulfate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.438e-36
Identity = 78/161 (48.45%), Postives = 104/161 (64.60%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQKDGVCPTPNAMAGQVVSYLEEEG 484
            KS LA +V + L+  G  +++LDGDN+RHGL  +L FS   R ENIRR+GEVAKL  + GLI + + ISP+R DR+A R  +P  +F+E++  + LE CEARD KGLYK ARAG+IK +TGID  YE PL  E+ +  +   C T       V+  L E G
Sbjct:   50 KSRLAHTVEERLHRLGCRTFVLDGDNVRHGLCSDLDFSEVGRKENIRRIGEVAKLMMEVGLIVMTAFISPFRADREAVRNRMPYGDFLEIYCQVSLEACEARDVKGLYKKARAGQIKNYTGIDSAYEAPLKPELVVNTE---CLTLEESVSAVLRMLHERG 207          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_AERS4 (Adenylyl-sulfate kinase OS=Aeromonas salmonicida (strain A449) GN=cysC PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.438e-36
Identity = 76/136 (55.88%), Postives = 96/136 (70.59%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KSTLA ++ + L   GK +Y+LDGDN+RHGL  +L F    R ENIRRVGEVAKL  DAGLI + + ISP+R +R+  R +L    F+EVF++ PL +CE RDPKGLYK ARAG+I+ FTGID  YE P   EI +
Sbjct:   37 KSTLAGALEQALAVEGKHTYLLDGDNVRHGLCGDLGFDDAARQENIRRVGEVAKLMVDAGLIVLTAFISPFRAERELVRNLLGADEFVEVFVDAPLAVCEERDPKGLYKKARAGEIRNFTGIDSAYEAPKQPEIHL 172          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALTY (Adenylyl-sulfate kinase OS=Salmonella typhimurium GN=cysC PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALTI (Adenylyl-sulfate kinase OS=Salmonella typhi GN=cysC PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALSV (Adenylyl-sulfate kinase OS=Salmonella schwarzengrund (strain CVM19633) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALPK (Adenylyl-sulfate kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALPB (Adenylyl-sulfate kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
BLAST of CX288906 vs. ExPASy Swiss-Prot
Match: CYSC_SALPA (Adenylyl-sulfate kinase OS=Salmonella paratyphi A GN=cysC PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 8.408e-36
Identity = 72/136 (52.94%), Postives = 99/136 (72.79%), Query Frame = 2
Query:    2 KSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLCFSAEDRTENIRRVGEVAKLFADAGLICIASLISPYRKDRDACRAMLPDSNFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEI 409
            KST+A ++ + L+ RG  +Y+LDGDN+RHGL ++L FS  DR ENIRRVGEVA L ADAGLI + + ISP+R +R   +  +    FIE+++N PL +CE RDPKGLYK ARAG+++ FTGID  YE P + ++ +
Sbjct:   41 KSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHL 176          
The following BLAST results are available for this feature:
BLAST of CX288906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
CYSC_PSEAE4.929e-3649.37Adenylyl-sulfate kinase OS=Pseudomonas aeruginosa ... [more]
CYSC_ECOL54.929e-3653.68Adenylyl-sulfate kinase OS=Escherichia coli O6:K15... [more]
CYSC_THEEB6.438e-3648.45Adenylyl-sulfate kinase OS=Thermosynechococcus elo... [more]
CYSC_AERS46.438e-3655.88Adenylyl-sulfate kinase OS=Aeromonas salmonicida (... [more]
CYSC_SALTY8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella typhimurium ... [more]
CYSC_SALTI8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella typhi GN=cys... [more]
CYSC_SALSV8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella schwarzengru... [more]
CYSC_SALPK8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella paratyphi A ... [more]
CYSC_SALPB8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella paratyphi B ... [more]
CYSC_SALPA8.408e-3652.94Adenylyl-sulfate kinase OS=Salmonella paratyphi A ... [more]

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Properties
Property NameValue
Genbank descriptionC02006G05SK IF1 Citrus clementina cDNA clone C02006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288906 ID=CX288906; Name=CX288906; organism=Citrus clementina; type=EST; length=563bp
GAAAAGTACGCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAA
AGCTGTCTTATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAA
AATCTTTGTTTCAGTGCAGAAGATCGAACTGAGAATATACGTAGGGTTGG
GGAAGTAGCAAAGCTTTTTGCGGATGCTGGTTTAATCTGCATTGCCAGTC
TGATATCTCCATATAGAAAAGACCGGGATGCTTGCCGTGCAATGTTGCCA
GATTCAAACTTTATTGAGGTTTTTATGAATATGCCTCTGGAATTGTGTGA
GGCAAGAGATCCAAAAGGACTCTACAAACTTGCGCGGGCTGGAAAGATTA
AAGGTTTCACTGGGATAGATGACCCTTATGAACCACCATTAAATTGCGAG
ATAGAAATAAAGCAGAAAGATGGAGTTTGCCCCACTCCCAATGCTATGGC
AGGACAAGTAGTGTCTTATTTGGAGGAGGAAGGATATCTACATTTTTAGT
GATCTGCTCTCTCCCAAATTTTATTTTATTTTATTTTATTTTTTTGGGGA
CCATCTCACATCT
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