CX288909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288909 vs. ExPASy Swiss-Prot
Match: RF1_METST (Peptide chain release factor subunit 1 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=prf1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.865e-17 Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 13 QRLKLYNKVPPNGLVLYTGTVVTDD-GKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKIL 534 QRLKL+ K P GLV++ G + G EK T F+P + + Y CD++F E L +++E + +G +V+D + TL G +++ T +P KH GGQS RF R+ H ++++ + F+ + + G+++ G K + + + KI+ Sbjct: 75 QRLKLFPKPPEKGLVMFVGMIPKGGPGTEKMETYVFQPPEAVQTYTYHCDSQFFVEPLKQIIEYKEVYGVVVLDRKESTIATLRGKRIDIIKHLTSGVPGKHKAGGQSQRRFDRVIELAAHEFLKRIGRHVDEAFL---PLKDELKGVLIGGPGHTKNDFVDGEYIHYEIHDKII 246
BLAST of CX288909 vs. ExPASy Swiss-Prot
Match: RF1_AERPE (Peptide chain release factor subunit 1 OS=Aeropyrum pernix GN=prf1 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 7.865e-17 Identity = 56/178 (31.46%), Postives = 89/178 (50.00%), Query Frame = 1 Query: 1 TSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKIL 534 ++A RL++ PPNGLVL+ G D K F P +PI Y D +F T+ L +++E ++ G I+++ + G L G EVL + +P KH GGQS R+ R+ + + +K E A+ + P + + G+I+AG K E + + D RL+ KIL Sbjct: 76 SAAMDRLQMLTSTPPNGLVLFCGE---DMSTGKFECFMFSPPEPIRVFYYRTDKRFITDFLEDMVEDNNAIGIIIVERDQATIGLLKGARLEVLKELEGFVPGKHKMGGQSQRRYERIIEQMVDEFFKKVGEEASNLLV-PLAEKGVLKGVIVAGPGLAKQEFVEGNYLDYRLK-KIL 248
BLAST of CX288909 vs. ExPASy Swiss-Prot
Match: RF1_SULSO (Peptide chain release factor subunit 1 OS=Sulfolobus solfataricus GN=prf1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15 Identity = 53/178 (29.78%), Postives = 84/178 (47.19%), Query Frame = 1 Query: 4 SAQQRLKLYNKVPPNGLVLYTG-TVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKIL 534 +A RL K+ NGLVL+ G T+D K F P + Y D +FH E L +++E +G I+++ + G L G E+L + +P KH GGQS R R+ E HN++++ E +F+ P + G++L G K + + D D R++ IL Sbjct: 73 AAIDRLNKIPKIDGNGLVLFCGENFDTEDFK----CFMFSPPDKVPLFFYRTDKEFHLEFLEDMVEDTAVYGLIIVERDEATIGLLKGARIEILEEIEGFVPGKHMMGGQSQRRIDRIIDEMYHNFLKEVGEKVNAYFM-PFVQNGKMKGVLLGGPGYAKEDFYKEDYVDYRIKNLIL 245 The following BLAST results are available for this feature:
BLAST of CX288909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288909 ID=CX288909; Name=CX288909; organism=Citrus clementina; type=EST; length=535bpback to top |