CX288918

Overview
NameCX288918
Unique NameCX288918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 4.746e-84
Identity = 155/211 (73.46%), Postives = 182/211 (86.26%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE MK VA  D +LTVEERNL+SV YKNVIGARRASWRI++SIEQKEE+KGN   V  IKEYRQ++E+ELAKIC+DIL V+D+HLIPS+ SGES VFY+K+KGDY+RYLAEF   D RK++AD SL+          +ELPPTHPIRLGLALNFSVFYYEILN+P++ACHLAKQAFD+AIAELD+L+EESYKDSTLIM
Sbjct:   10 AKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIM 220          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 2.604e-82
Identity = 153/211 (72.51%), Postives = 179/211 (84.83%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEEAKGNE  V  I++YR ++E EL+KIC DILSV+ +HLI S+ +GES VFYYKMKGDY+RYLAEF  A+ RKEAAD SL+          +ELPPTHPIRLGLALNFSVFYYEILNSP+RACHLAKQAFD+A+A+L++L+E+SYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLETLSEDSYKDSTLIM 222          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 5.801e-82
Identity = 153/211 (72.51%), Postives = 176/211 (83.41%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+ MVE MK VA  D ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE+KGN   V+ IKEYRQ++E EL  IC DIL+V+++HLIP++ S ES VFYYKMKGDYYRYLAEF   + R+ +AD SL+          +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELDSL+EESYKDSTLIM
Sbjct:   13 AKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIM 223          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 7.577e-82
Identity = 155/213 (72.77%), Postives = 185/213 (86.85%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFK-GADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK+DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ ILS+++ HL+PS+++ ES VFY KMKGDY+RYLAEFK GA +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVEFMEKVAKVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIM 224          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.879e-81
Identity = 150/211 (71.09%), Postives = 180/211 (85.31%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE MKKVA  + +L+VEERNL+SV YKN+IGARRASWRI+SSIEQKEE++GN +    IKEYR+++EDEL+ IC+D+LSV+++HLIP++T+GES VFYYKMKGDYYRYLAEF   +  KEAAD SL+          +ELPPT P+RLGLALNFSVFYYEIL+SPE ACHLAKQ FDEAI+ELDSL+EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIM 222          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.879e-81
Identity = 153/213 (71.83%), Postives = 178/213 (83.57%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE  V  IK+YR ++E EL KIC+ IL ++D HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELDSL+EESYKDSTLIM
Sbjct:   16 AKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIM 228          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.879e-81
Identity = 156/213 (73.24%), Postives = 180/213 (84.51%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL-DV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK  DV ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE  V  IKEYR R+E EL+KIC+ IL ++D HL+PS+T+ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELDSL EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 6.414e-81
Identity = 152/213 (71.36%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L+EESYKDSTLIM
Sbjct:   16 AKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIM 228          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.094e-80
Identity = 154/213 (72.30%), Postives = 180/213 (84.51%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL-DV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK  DV ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE  V  IKEYR R+E EL+KIC+ IL ++D HL+PS+T+ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 298.901 bits (764), Expect = 1.429e-80
Identity = 151/213 (70.89%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L+EESYKDSTLIM
Sbjct:   16 AKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIM 228          
The following BLAST results are available for this feature:
BLAST of CX288918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_TRIHA4.746e-8473.4614-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_CANAL2.604e-8272.5114-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
RAD24_SCHPO5.801e-8272.51DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
14331_SOLTU7.577e-8272.7714-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
RAD25_SCHPO2.879e-8171.09DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433B_HORVU2.879e-8171.8314-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
1433A_HORVU2.879e-8173.2414-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14335_ORYSJ6.414e-8171.3614-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14336_ORYSJ1.094e-8072.3014-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14332_ORYSJ1.429e-8070.8914-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC02006H07SK IF1 Citrus clementina cDNA clone C02006H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288918 ID=CX288918; Name=CX288918; organism=Citrus clementina; type=EST; length=635bp
GCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAAGCCAT
GAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATC
TGGTGTCTGTTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGG
AGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACA
AAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTG
CAAAGATCTGTAATGATATATTGTCAGTCATTGATGAACACCTAATCCCA
TCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAAGGAGA
TTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAG
CTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCC
TCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTTAACTT
TTCTGTTTTCTACTATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACC
TGGCTAAACAAGCATTTGATGAGGCTATTGCTGAACTTGATAGCCTTAAT
GAAGAGTCCTACAAGGACAGCACCCTTATTATGCA
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