CX288918

Overview
NameCX288918
Unique NameCX288918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 7.092e-80
Identity = 152/213 (71.36%), Postives = 181/213 (84.98%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK +DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE++V  IKEYR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDY+RYLAEFK   +RKEAA+ ++           ++L PTHPIRLGLALNFSVFYYEILNSP++AC+LAKQAFDEAI+ELD+L EESYKDSTLIM
Sbjct:   10 AKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIM 222          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 9.262e-80
Identity = 150/213 (70.42%), Postives = 181/213 (84.98%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLD--VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK+    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ IL++++ HLIPS+++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIM
Sbjct:   14 AKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIM 226          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.210e-79
Identity = 151/213 (70.89%), Postives = 178/213 (83.57%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVA+     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IK+YR ++E EL+KIC+ IL ++D HL+PSST+ ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVARTVDTEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKDYRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.063e-79
Identity = 153/213 (71.83%), Postives = 180/213 (84.51%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK +DVE L+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+KGNE +V  IK+YR ++E EL+KIC+ IL+V++ HLIPS++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFD+AIAELD+L EESYKDSTLIM
Sbjct:   11 AKLAEQAERYEEMVEFMEKVAKTVDVEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIESELSKICDGILNVLEAHLIPSASPAESKVFYLKMKGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIM 223          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.695e-79
Identity = 150/213 (70.42%), Postives = 178/213 (83.57%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KV+      ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE++V  I+EYR ++E+EL+KIC+ IL ++D  LIPS+ SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 2.695e-79
Identity = 150/213 (70.42%), Postives = 176/213 (82.63%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L+EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 294.278 bits (752), Expect = 3.520e-79
Identity = 150/212 (70.75%), Postives = 176/212 (83.02%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKG-NEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+K  +E  V+ I+ YR ++E EL KI +DILSV+D HLIPS+T+GES VFYYKMKGDY+RYLAEF   D R++A + SL+          +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AIAELD+L+EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIM 223          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14331_MAIZE (14-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 3.520e-79
Identity = 150/213 (70.42%), Postives = 176/213 (82.63%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L+EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLETHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 4.597e-79
Identity = 147/213 (69.01%), Postives = 178/213 (83.57%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVA+     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+KIC+ IL ++D  L+P+S +G+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   18 AKLAEQAERYEEMVEFMEKVAEAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 230          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 6.003e-79
Identity = 149/213 (69.95%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMV+ M+KV+      ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE++VK IKEYR ++E EL+ IC+ IL ++D +LIPS+++G+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   10 AKLAEQAERYEEMVQFMEKVSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 222          
The following BLAST results are available for this feature:
BLAST of CX288918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14333_ORYSJ7.092e-8071.3614-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
1433_MESCR9.262e-8070.4214-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433_LILLO1.210e-7970.8914-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
14333_ARATH2.063e-7971.8314-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
1433C_TOBAC2.695e-7970.4214-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
14332_MAIZE2.695e-7970.4214-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
BMH2_YEAST3.520e-7970.75Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
14331_MAIZE3.520e-7970.4214-3-3-like protein GF14-6 OS=Zea mays GN=GRF1 PE=... [more]
14334_ARATH4.597e-7969.0114-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14332_SOLLC6.003e-7969.9514-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]

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Properties
Property NameValue
Genbank descriptionC02006H07SK IF1 Citrus clementina cDNA clone C02006H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288918 ID=CX288918; Name=CX288918; organism=Citrus clementina; type=EST; length=635bp
GCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAAGCCAT
GAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATC
TGGTGTCTGTTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGG
AGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACA
AAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTG
CAAAGATCTGTAATGATATATTGTCAGTCATTGATGAACACCTAATCCCA
TCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAAGGAGA
TTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAG
CTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCC
TCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTTAACTT
TTCTGTTTTCTACTATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACC
TGGCTAAACAAGCATTTGATGAGGCTATTGCTGAACTTGATAGCCTTAAT
GAAGAGTCCTACAAGGACAGCACCCTTATTATGCA
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