CX288918

Overview
NameCX288918
Unique NameCX288918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 293.508 bits (750), Expect = 6.003e-79
Identity = 148/213 (69.48%), Postives = 177/213 (83.10%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+ IC+ IL ++D  L+P++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           SEL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   17 AKLAEQAERYEEMVEFMEKVAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 229          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 7.841e-79
Identity = 150/213 (70.42%), Postives = 182/213 (85.45%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKL-DVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EM+E M+KVAK  DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E +L+KIC+ ILS+++ +LIPS+++ ES VF+ KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIM
Sbjct:   13 AKLAEQAERYEEMIEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVNTIKEYRSKIEADLSKICDGILSLLESNLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIM 225          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.024e-78
Identity = 151/213 (70.89%), Postives = 178/213 (83.57%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKV-AKLDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KV A  D E LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  I++YR ++E EL+ IC+ IL ++D  LIPS++SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVSANADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTGYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.337e-78
Identity = 151/213 (70.89%), Postives = 181/213 (84.98%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAK-LDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK +DVE LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL+KIC+ IL++++ HLIP +++ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNS +RAC+LAKQAFD+AIAELD+L EESYKDSTLIM
Sbjct:   13 AKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIM 225          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 291.967 bits (746), Expect = 1.747e-78
Identity = 150/212 (70.75%), Postives = 175/212 (82.55%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKG-NEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+K  +E  V+ I  YR ++E EL KI +DILSV+D HLIPS+T+GES VFYYKMKGDY+RYLAEF   D R++A + SL+          +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AIAELD+L+EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVENMKTVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIM 223          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 2.979e-78
Identity = 149/213 (69.95%), Postives = 178/213 (83.57%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKV-AKLDV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KV A +D  ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I+EYR ++E EL+ IC+ IL ++D  LIP++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 224          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.891e-78
Identity = 148/213 (69.48%), Postives = 175/213 (82.16%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKV--AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KV  A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+++V  I++YR ++E EL+ ICN IL ++D  LIPS+  G+S VFY KMKGDY+RYLAEFK   +RK+AA+ +L           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   15 AKLAEQAERYEEMVEFMEKVTAAVESEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDEHVSVIRDYRSKIETELSNICNGILKLLDSRLIPSAALGDSKVFYLKMKGDYHRYLAEFKSGAERKDAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIM 227          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 8.669e-78
Identity = 148/213 (69.48%), Postives = 179/213 (84.04%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKVAK-LDV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KVAK +D  ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  IK+YR ++E EL+KIC+ IL+++D HL+P+++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           ++L PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+ELD+L EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIM 224          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 8.669e-78
Identity = 150/214 (70.09%), Postives = 174/214 (81.31%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KV   A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL  ICN IL ++D  LI S+ +G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 225          
BLAST of CX288918 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 8.669e-78
Identity = 150/214 (70.09%), Postives = 174/214 (81.31%), Query Frame = 1
Query:    1 ARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIM 633
            A+LAEQAERY+EMVE M+KV   A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL  ICN IL ++D  LI S+ +G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIM
Sbjct:   12 AKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 225          
The following BLAST results are available for this feature:
BLAST of CX288918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14331_ARATH6.003e-7969.4814-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14334_SOLLC7.841e-7970.4214-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
1433_PEA1.024e-7870.8914-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433E_TOBAC1.337e-7870.8914-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
BMH1_YEAST1.747e-7870.75Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
14332_ARATH2.979e-7869.9514-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
1433A_VICFA3.891e-7869.4814-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
14337_ARATH8.669e-7869.4814-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14336_SOLLC8.669e-7870.0914-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU8.669e-7870.0914-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC02006H07SK IF1 Citrus clementina cDNA clone C02006H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288918 ID=CX288918; Name=CX288918; organism=Citrus clementina; type=EST; length=635bp
GCCAGACTTGCTGAGCAAGCCGAGAGATACGACGAGATGGTTGAAGCCAT
GAAGAAAGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATC
TGGTGTCTGTTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGG
AGGATTTTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACA
AAATGTGAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTG
CAAAGATCTGTAATGATATATTGTCAGTCATTGATGAACACCTAATCCCA
TCCTCCACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAAGGAGA
TTATTACCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAG
CTGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCC
TCAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTTAACTT
TTCTGTTTTCTACTATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACC
TGGCTAAACAAGCATTTGATGAGGCTATTGCTGAACTTGATAGCCTTAAT
GAAGAGTCCTACAAGGACAGCACCCTTATTATGCA
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