CX288920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 6.294e-13 Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN A GF+ Y +F+ A ++ GFGTTG + +E+ AFLA +T+ G+ A G AWG C+ E + +YC S + +PC PG Sbjct: 86 FDRMLLHRNDGACQAKGFYTYDAFVAAASAFR--GFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQ--WPCAPG 183
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.074e-12 Identity = 39/111 (35.14%), Postives = 53/111 (47.75%), Query Frame = 2 Query: 251 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 IS+ F+ RN F+ Y +FITA ++ GFGTTG + +E+ AF A +T+ G+ A G AWG CY E SYC S + +PC PG Sbjct: 85 ISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFR--GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQ--WPCAPG 191
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12 Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 FE RN A GF+ Y++F+ A + FG TG + +E+ AFL +T+ G+ A GP +WG C+ E +P YC S + +PC PG Sbjct: 98 FERLLLHRNDGACPARGFYTYEAFLAAAAAFP--AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPE--WPCAPG 195
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.831e-12 Identity = 36/112 (32.14%), Postives = 55/112 (49.11%), Query Frame = 2 Query: 248 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 ++S QF+ RN A GF+ Y +F+ A + GFG TG+ + +++ AFLA +T+ G+ A G AWG C+ E + YC S + +PC PG Sbjct: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFP--GFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQ--WPCAPG 131
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.392e-12 Identity = 38/102 (37.25%), Postives = 50/102 (49.02%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN GF+ Y +FI A + GFGTTG K KE+ AFLA +T+ G+ A GP AWG C+ E + + YC +PC PG Sbjct: 89 FDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN--GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPG 185
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.124e-12 Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN A GF+ Y +FI A Y FG TG + +EI AFL +T+ G+ A GP AWG C+ E +PS +YC S +PC PG Sbjct: 85 FDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYC--SATPQFPCAPG 181
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.080e-12 Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN A GF+ Y +FI A Y FG TG + +EI AFL +T+ G+ A GP AWG C+ E +PS +YC S +PC PG Sbjct: 84 FDQVLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYC--SATPQFPCAPG 180
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.328e-12 Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN GF+ Y +FI A + GFGT+G + +EI AF A +T+ G+ A GP AWG C+ E YC S + +PC PG Sbjct: 84 FDQMLKHRNDNACQGKGFYSYNAFINAARSFP--GFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQ--WPCAPG 181
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.328e-12 Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN GF+ Y +FI A + GFGT+G + +EI AF A +T+ G+ A GP AWG C+ E YC S + +PC PG Sbjct: 89 FDQMLKHRNDNACQGKGFYSYNAFINAARSFP--GFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQ--WPCAPG 186
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.959e-12 Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 2 Query: 275 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 +F+ RN A GF+ Y +FI A + F TTG + +E+ AFLA +T+ G G A GP WG CYN E++P+ YC + YPC PG Sbjct: 80 RFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFP--AFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPA-DYC--QWDPNYPCAPG 178 The following BLAST results are available for this feature:
BLAST of CX288920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288920 ID=CX288920; Name=CX288920; organism=Citrus clementina; type=EST; length=585bpback to top |