CX288920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.088e-12 Identity = 38/102 (37.25%), Postives = 50/102 (49.02%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F + RN GF+ Y +FI A + GFGTTG + +EI AFLA +T+ G+ A GP AWG CY E +YC S + +PC G Sbjct: 74 FNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFP--GFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQ--WPCAAG 171
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.454e-11 Identity = 37/103 (35.92%), Postives = 51/103 (49.51%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ + RN F+ Y +F+TA + GFGTTG + +EI AFLA +T+ G+ A GP AWG C+ E YC S + +PC PG Sbjct: 81 FDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQ--WPCAPG 179
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.454e-11 Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 2 Query: 251 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKY 562 +SD +F+ RN A GF+ Y +FI+A ++ FG TG L + +EI AFL +T+ G+ A GP AWG CY E++ Q YCD S Y Sbjct: 89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPD--FGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNY 189
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.511e-11 Identity = 37/103 (35.92%), Postives = 51/103 (49.51%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ + RN G F+ Y +FI+A + GFGTTG + +EI AF A +T+ G+ A GP AWG C+ E YC S + +PC PG Sbjct: 75 FDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQ--WPCAPG 173
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.511e-11 Identity = 37/103 (35.92%), Postives = 51/103 (49.51%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ + RN G F+ Y +FI+A + GFGTTG + +EI AF A +T+ G+ A GP AWG C+ E YC S + +PC PG Sbjct: 77 FDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQ--WPCAPG 175 The following BLAST results are available for this feature:
BLAST of CX288920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288920 ID=CX288920; Name=CX288920; organism=Citrus clementina; type=EST; length=585bpback to top |