CX288956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4C_MOUSE (ADP-ribosylation factor-like protein 4C OS=Mus musculus GN=Arl4c PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.777e-26 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 2 Query: 101 SRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN-----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRM 403 S + A + + I+M+GLD+AGKTT+LY+LK E V T+PTIGFN E ++ N IS WDVGGQ+K+RPLW+ Y + T G+I+V DS D DR+ EA+ ELH++ Sbjct: 6 SNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKV 111
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4C_HUMAN (ADP-ribosylation factor-like protein 4C OS=Homo sapiens GN=ARL4C PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.777e-26 Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 2 Query: 101 SRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN-----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRM 403 S + A + + I+M+GLD+AGKTT+LY+LK E V T+PTIGFN E ++ N IS WDVGGQ+K+RPLW+ Y + T G+I+V DS D DR+ EA+ ELH++ Sbjct: 6 SNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKV 111
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.851e-26 Identity = 53/113 (46.90%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 86 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELR 424 F +++R F E ++++VGL+AAGKTT LYKL L E+V+T PT+G N+E Y+NI +WD+GGQD +R W Y+ NTQ +I V DS DR RV ++EL +M+ + L+ Sbjct: 8 FASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLK 120
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4A_HUMAN (ADP-ribosylation factor-like protein 4A OS=Homo sapiens GN=ARL4A PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.278e-24 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 89 TKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDE 418 T + S L + + I+++GLD AGKTT+LY+L+ E V T+PT GFN E ++ K ++F WDVGGQ+K+RPLW+ Y + T G++FV DS D +R+ EA+ ELH++ E Sbjct: 9 TSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISE 123
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4A_RAT (ADP-ribosylation factor-like protein 4A OS=Rattus norvegicus GN=Arl4a PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.669e-24 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 89 TKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDE 418 T + S L + + I+++GLD AGKTT+LY+L+ E V T+PT GFN E ++ K ++F WDVGGQ+K+RPLW+ Y + T G++FV DS D +R+ EA+ ELH++ E Sbjct: 9 TSILSSLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISE 123
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4A_MOUSE (ADP-ribosylation factor-like protein 4A OS=Mus musculus GN=Arl4a PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.669e-24 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 89 TKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDE 418 T + S L + + I+++GLD AGKTT+LY+L+ E V T+PT GFN E ++ K ++F WDVGGQ+K+RPLW+ Y + T G++FV DS D +R+ EA+ ELH++ E Sbjct: 9 TSILSSLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISE 123
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4A_BOVIN (ADP-ribosylation factor-like protein 4A OS=Bos taurus GN=ARL4A PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.669e-24 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 89 TKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDE 418 T + S L + + I+++GLD AGKTT+LY+L+ E V T+PT GFN E ++ K ++F WDVGGQ+K+RPLW+ Y + T G++FV DS D +R+ EA+ ELH++ E Sbjct: 9 TSILSSLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISE 123
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.847e-24 Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 2 Query: 74 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRMVNDDELRDA 430 MGL KLF + K+ +I++VGLD AGKTTILY + V T PTIG NVE V Y+N+ F +WD+GGQ+ +R W Y+ T +I V DS+D R+ +++LH M+ ++L A Sbjct: 1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARA 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4D_PONAB (ADP-ribosylation factor-like protein 4D OS=Pongo abelii GN=ARL4D PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.343e-24 Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 68 TEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRM 403 TEM T + A + ++++GLD+AGKT++LY+LK E V ++PT GFN E + + I+F VWDVGGQ+K+RPLWR Y + T GL+FV D+ + +R+ EA+ ELHR+ Sbjct: 6 TEMAPTASSFLPHFQA---LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRI 119
BLAST of CX288956 vs. ExPASy Swiss-Prot
Match: ARL4D_HUMAN (ADP-ribosylation factor-like protein 4D OS=Homo sapiens GN=ARL4D PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 6.343e-24 Identity = 53/117 (45.30%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 68 TEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVADSNDRDRVVEARDELHRM 403 TEM T + A + ++++GLD+AGKT++LY+LK E V ++PT GFN E + + I+F VWDVGGQ+K+RPLWR Y + T GL+FV D+ + +R+ EA+ ELHR+ Sbjct: 6 TEMAPTASSFLPHFQA---LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRI 119 The following BLAST results are available for this feature:
BLAST of CX288956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288956 ID=CX288956; Name=CX288956; organism=Citrus clementina; type=EST; length=432bpback to top |