CX289046 | Citrus Genome Database

Overview


Name	CX289046
Unique Name	CX289046
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	521

Libraries


Library Name	Type
IF1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433E_SHEEP (14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  DGE+  K
Sbjct:  125 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244

HSP 2 Score: 40.817 bits (94), Expect = 4.063e-50
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQ VE+EL  IC DI+ V+D+HLIP+A+ G+
Sbjct:   86 RQMVETELKLICCDILDVLDKHLIPAANTGE 116

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433E_RAT (14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  DGE+  K
Sbjct:  125 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244

HSP 2 Score: 40.817 bits (94), Expect = 4.063e-50
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQ VE+EL  IC DI+ V+D+HLIP+A+ G+
Sbjct:   86 RQMVETELKLICCDILDVLDKHLIPAANTGE 116

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433E_MOUSE (14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  DGE+  K
Sbjct:  125 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244

HSP 2 Score: 40.817 bits (94), Expect = 4.063e-50
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQ VE+EL  IC DI+ V+D+HLIP+A+ G+
Sbjct:   86 RQMVETELKLICCDILDVLDKHLIPAANTGE 116

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433E_HUMAN (14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  DGE+  K
Sbjct:  125 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244

HSP 2 Score: 40.817 bits (94), Expect = 4.063e-50
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQ VE+EL  IC DI+ V+D+HLIP+A+ G+
Sbjct:   86 RQMVETELKLICCDILDVLDKHLIPAANTGE 116

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433E_CHICK (14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  DGE+  K
Sbjct:  125 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244

HSP 2 Score: 40.817 bits (94), Expect = 4.063e-50
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQ VE+EL  IC DI+ V+D+HLIP+A+ G+
Sbjct:   86 RQMVETELKLICCDILDVLDKHLIPAANTGE 116

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433E_BOVIN (14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.063e-50
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEF  G+++KEAA NS+            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTL+EESYKDSTLIMQLLRDNLTLWTSD+  DGE+  K
Sbjct:  125 KGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNK 244

HSP 2 Score: 40.817 bits (94), Expect = 4.063e-50
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQ VE+EL  IC DI+ V+D+HLIP+A+ G+
Sbjct:   86 RQMVETELKLICCDILDVLDKHLIPAANTGE 116

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.295e-50
Identity = 91/134 (67.91%), Postives = 103/134 (76.87%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDAE 493
            KGDY+RYLAEFK G ++KEAA +++            DLPPTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +      +     KV   EDAE
Sbjct:  128 KGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDMQDPAAGDDREGADMKV---EDAE 258

HSP 2 Score: 38.891 bits (89), Expect = 5.295e-50
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R  VE ELS IC  I+ ++D+HLIP+AS G+
Sbjct:   89 RTVVEEELSKICASILQLLDDHLIPTASTGE 119

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 5.295e-50
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD  EDG D  K
Sbjct:  131 KGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIK 250

HSP 2 Score: 39.6614 bits (91), Expect = 5.295e-50
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R ++E+ELS IC+ I+ ++D HL+PSA+A +
Sbjct:   92 RSRIETELSKICDGILKLLDSHLVPSATAAE 122

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.996e-50
Identity = 90/130 (69.23%), Postives = 101/130 (77.69%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGG 481
            KGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD  E+G D  K   +   G G
Sbjct:  131 KGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAASKPEGEG 260

HSP 2 Score: 39.2762 bits (90), Expect = 8.996e-50
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R ++E+ELS IC+ I+ ++D HL+PSA+A +
Sbjct:   92 RTRIETELSKICDGILKLLDSHLVPSATAAE 122

BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.529e-49
Identity = 88/120 (73.33%), Postives = 99/120 (82.50%), Query Frame = 2

Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  K
Sbjct:  129 KGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIK 248

HSP 2 Score: 36.965 bits (84), Expect = 1.529e-49
Identity = 16/30 (53.33%), Postives = 22/30 (73.33%), Query Frame = 3

Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+ESEL+ ICN I+ ++D  LI SA+ G
Sbjct:   90 RSKIESELTSICNGILKLLDSKLIGSAATG 119

The following BLAST results are available for this feature:

BLAST of CX289046 vs. ExPASy Swiss-Prot

BLAST of CX289046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
1433E_SHEEP	4.063e-50	71.67	14-3-3 protein epsilon OS=Ovis aries GN=YWHAE PE=1...	[more]
1433E_RAT	4.063e-50	71.67	14-3-3 protein epsilon OS=Rattus norvegicus GN=Ywh...	[more]
1433E_MOUSE	4.063e-50	71.67	14-3-3 protein epsilon OS=Mus musculus GN=Ywhae PE...	[more]
1433E_HUMAN	4.063e-50	71.67	14-3-3 protein epsilon OS=Homo sapiens GN=YWHAE PE...	[more]
1433E_CHICK	4.063e-50	71.67	14-3-3 protein epsilon OS=Gallus gallus GN=YWHAE P...	[more]
1433E_BOVIN	4.063e-50	71.67	14-3-3 protein epsilon OS=Bos taurus GN=YWHAE PE=2...	[more]
1433_CHLRE	5.295e-50	67.91	14-3-3-like protein OS=Chlamydomonas reinhardtii P...	[more]
14336_ORYSJ	5.295e-50	74.17	14-3-3-like protein GF14-F OS=Oryza sativa subsp. ...	[more]
1433A_HORVU	8.996e-50	69.23	14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1	[more]
14336_SOLLC	1.529e-49	73.33	14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P...	[more]

Pages

Properties


Property Name	Value
Genbank description	C02008E03SK IF1 Citrus clementina cDNA clone C02008E03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX289046 ID=CX289046; Name=CX289046; organism=Citrus clementina; type=EST; length=521bp
ATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATATCATG
ACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGGAGAT
TATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAGAGGC
TGCTGCTAATTCAATGAAAGCGTATGAGACAGCTACCACTGCTGCAGAGG
CTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAATTTC
TCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCCATCT
TGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTCAACG
AGGAGTCCTACAAAGACAGCACCTTAATTATGCAGCTTCTTAGGGACAAC
CTTACCTTATGGACTTCTGACATTCCAGAAGATGGAGAAGATGCCCAGAA
GGCTAATGGCACTGCCAAAGTTGGTGGGGGAGAAGATGCAGAGGTAGGTT
TTCTCTTTTAAATGCTATTAT