CX289046

Overview
NameCX289046
Unique NameCX289046
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 2.163e-48
Identity = 86/126 (68.25%), Postives = 99/126 (78.57%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAK 469
            KGDY+RYLAEFK G E+K+AA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D  D  K     K
Sbjct:  128 KGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKEAAAPK 253          

HSP 2 Score: 37.7354 bits (86), Expect = 2.163e-48
Identity = 15/30 (50.00%), Postives = 24/30 (80.00%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+E+ELS IC+ I+ ++D  LIP+A++G
Sbjct:   89 RSKIETELSGICDGILKLLDSRLIPAAASG 118          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 3.676e-48
Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDA 445
            KGDY+RYLAEFK GDE+K AA ++M            DL PTHPIRLGLALNFSVFYYEI+NS E+AC +AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ E  ++A
Sbjct:  131 KGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 248          

HSP 2 Score: 41.9726 bits (97), Expect = 3.676e-48
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R KVE+ELS IC+ I+ ++D HLIPSA+A +
Sbjct:   92 RSKVETELSSICSGILRLLDSHLIPSATASE 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 4.788e-48
Identity = 84/117 (71.79%), Postives = 97/117 (82.91%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGED 442
            KGDY+RYLAEFK G E+K+AA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +D  D
Sbjct:  133 KGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDVAD 249          

HSP 2 Score: 38.5058 bits (88), Expect = 4.788e-48
Identity = 15/30 (50.00%), Postives = 25/30 (83.33%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+E+ELSDIC+ I+ ++D  L+P+A++G
Sbjct:   94 RSKIETELSDICDGILKLLDTILVPAAASG 123          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.244e-48
Identity = 84/120 (70.00%), Postives = 97/120 (80.83%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+KEAA +++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ ++  D  K
Sbjct:  127 KGDYHRYLAEFKAGAERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          

HSP 2 Score: 40.4318 bits (93), Expect = 6.244e-48
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSAS 86
            R K+ESELS IC+ I+ V++ HLIPSAS
Sbjct:   88 RGKIESELSKICDGILNVLEAHLIPSAS 115          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.135e-48
Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 451
            KGDY+RYLAEFK G E+K+AA  ++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG D  +
Sbjct:  136 KGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMR 255          

HSP 2 Score: 36.5798 bits (83), Expect = 8.135e-48
Identity = 15/29 (51.72%), Postives = 24/29 (82.76%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASA 89
            R +VE+ELS+IC  I+ ++DE L+P+A+A
Sbjct:   97 RARVEAELSNICAGILRLLDERLVPAAAA 125          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.140e-48
Identity = 81/118 (68.64%), Postives = 97/118 (82.20%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDA 445
            KGDY+RY+AEFK GDE+K AA ++M            D+ PTHPIRLGLALNFSVFYYEI+NS ++AC++AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ E  ++A
Sbjct:  131 KGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDEA 248          

HSP 2 Score: 42.3578 bits (98), Expect = 8.140e-48
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            R KVESELS +C+ I+ ++D HLIPSA A +
Sbjct:   92 RSKVESELSSVCSGILKLLDSHLIPSAGASE 122          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.060e-47
Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVGGGEDA 490
            KGDYYRYLAEF  G++++ +A  S++           +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD+L+EESYKDSTLIMQLLRDNLTLWTS    D E +  A G    G  E+A
Sbjct:  127 KGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTS----DAEYSAAAAGGNTEGAQENA 255          

HSP 2 Score: 43.5134 bits (101), Expect = 1.060e-47
Identity = 17/31 (54.84%), Postives = 26/31 (83.87%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAGK 95
            RQK+E EL  IC DI+TV+++HLIP+A++ +
Sbjct:   88 RQKIEQELDTICQDILTVLEKHLIPNAASAE 118          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.060e-47
Identity = 89/128 (69.53%), Postives = 99/128 (77.34%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKVG 475
            KGDY+RYLAEFK G E+KEAA +++            DL PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +   D  K     + G
Sbjct:  129 KGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKETSKQQPG 256          

HSP 2 Score: 35.039 bits (79), Expect = 1.060e-47
Identity = 14/29 (48.28%), Postives = 24/29 (82.76%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASA 89
            R K+E+ELS IC+ I+ +++ +LIPSA++
Sbjct:   90 RGKIEAELSKICDGILNLLESNLIPSAAS 118          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.061e-47
Identity = 87/126 (69.05%), Postives = 98/126 (77.78%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAK 469
            KGDYYRYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+EL TL EESYKDSTLIMQL  DNLTLWTSD+ +DG D  K    A+
Sbjct:  127 KGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELGTLGEESYKDSTLIMQLFCDNLTLWTSDMQDDGTDEIKEPSKAE 252          

HSP 2 Score: 35.8094 bits (81), Expect = 1.061e-47
Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSASAG 92
            R K+ESEL+ ICN I+ ++D  LI +A+ G
Sbjct:   88 RSKIESELTSICNGILKLLDSKLIGTAATG 117          
BLAST of CX289046 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.347e-47
Identity = 88/122 (72.13%), Postives = 99/122 (81.15%), Query Frame = 2
Query:   92 KGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDI-PEDGEDAQKA 454
            KGDY+RYLAEFK G E+KEAA +++            DL PTHPIRLGLALNFSVFYYEI+NS +RAC LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSD+  E G+D ++A
Sbjct:  130 KGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEA 251          

HSP 2 Score: 36.965 bits (84), Expect = 2.347e-47
Identity = 15/28 (53.57%), Postives = 23/28 (82.14%), Query Frame = 3
Query:    3 RQKVESELSDICNDIMTVIDEHLIPSAS 86
            R K+E+ELS IC+ I+ +++ HLIP+AS
Sbjct:   91 RGKIETELSKICDGILNLLEAHLIPAAS 118          
The following BLAST results are available for this feature:
BLAST of CX289046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14332_ARATH2.163e-4868.2514-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14338_ARATH3.676e-4871.1914-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14331_ARATH4.788e-4871.7914-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14333_ARATH6.244e-4870.0014-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14331_ORYSJ8.135e-4871.6714-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
14336_ARATH8.140e-4868.6414-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
RAD24_SCHPO1.060e-4764.66DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433A_SOYBN1.060e-4769.5314-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
1433A_TOBAC1.061e-4769.0514-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
14335_ARATH2.347e-4772.1314-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC02008E03SK IF1 Citrus clementina cDNA clone C02008E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289046 ID=CX289046; Name=CX289046; organism=Citrus clementina; type=EST; length=521bp
ATAGGCAAAAGGTTGAATCTGAATTGTCGGACATTTGCAATGATATCATG
ACTGTCATTGATGAGCATCTTATTCCTTCAGCAAGTGCTGGAAAGGAGAT
TATTATCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAGAGGC
TGCTGCTAATTCAATGAAAGCGTATGAGACAGCTACCACTGCTGCAGAGG
CTGATTTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAATTTC
TCTGTCTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCCATCT
TGCAAAACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACACCCTCAACG
AGGAGTCCTACAAAGACAGCACCTTAATTATGCAGCTTCTTAGGGACAAC
CTTACCTTATGGACTTCTGACATTCCAGAAGATGGAGAAGATGCCCAGAA
GGCTAATGGCACTGCCAAAGTTGGTGGGGGAGAAGATGCAGAGGTAGGTT
TTCTCTTTTAAATGCTATTAT
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