CX289092

Overview
NameCX289092
Unique NameCX289092
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length397
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.242e-49
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 2
Query:   47 SNAEDQQNQQGGHKEVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            +N      Q+  H EVGHKSLL+SD LYQYIL+TSVYPRE ESMKELRE+TAKHPWN+MTTSADEGQFLNML+KL+ AK TMEIGVYTGYSLLATALALP+DG ILAMDINRENYEL
Sbjct:   20 ANGNGNGEQKTRHSEVGHKSLLKSDDLYQYILDTSVYPREPESMKELREITAKHPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYEL 136          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT_PINTA (Caffeoyl-CoA O-methyltransferase OS=Pinus taeda GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48
Identity = 92/105 (87.62%), Postives = 100/105 (95.24%), Query Frame = 2
Query:   83 HKEVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            H+EVGHKSLLQSDALYQYILETSVYPRE E MKEL  +TAKHPWN+MTTSADEGQFL +LLKL+NAKNTMEIGVYTGYSLL+TALALPDDGKILAMDINRENY++
Sbjct:   27 HQEVGHKSLLQSDALYQYILETSVYPREPEPMKELPRVTAKHPWNLMTTSADEGQFLGLLLKLINAKNTMEIGVYTGYSLLSTALALPDDGKILAMDINRENYDI 131          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.154e-46
Identity = 90/101 (89.11%), Postives = 95/101 (94.06%), Query Frame = 2
Query:   95 GHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            GHKS LQSDAL QYILETSVYPRE ESMKELRE+TAKHPWN+M TSADEGQFLNM LKL+NAKNTMEIGVYT YSLLATALA+PDDGKILAMDINRENYE+
Sbjct:    4 GHKSKLQSDALRQYILETSVYPREPESMKELREVTAKHPWNLMRTSADEGQFLNMSLKLINAKNTMEIGVYTDYSLLATALAIPDDGKILAMDINRENYEI 104          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.195e-30
Identity = 60/99 (60.61%), Postives = 80/99 (80.81%), Query Frame = 2
Query:  101 KSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            K LL+S+ LY+YILETSVYPRE E ++ELR +T  HP   M T+ D GQ + MLL LVNA+ T+E+GV+TGYSLL TAL LP+DGK++A+D+NR++YE+
Sbjct:    7 KGLLKSEELYKYILETSVYPREPEVLRELRNITHNHPQAGMATAPDAGQLMGMLLNLVNARKTIEVGVFTGYSLLLTALTLPEDGKVIAIDMNRDSYEI 105          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT_STELP (Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.290e-28
Identity = 61/103 (59.22%), Postives = 79/103 (76.70%), Query Frame = 2
Query:   89 EVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            EV    LLQS+ L+QYIL+TSV+PRE+E +KELR+ T  HP + M TS   GQ L+ +LK V  K T+E+GV+TGYSLLATAL++PDDGKI A+DI+RE Y +
Sbjct:   12 EVKDTGLLQSEQLHQYILDTSVFPRESEHLKELRKATESHPMSFMGTSPLAGQLLSFMLKTVKPKKTIEVGVFTGYSLLATALSIPDDGKITAVDIDREAYNV 114          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.991e-28
Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 2
Query:   89 EVGHKSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNV--MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            E+  K +L+S+AL QYI+ETS YPRE E +KELR+ T +   N+  M    DEG FL+ML+K++NAKNT+EIGV+TGYSLL TALALP+DG+I A+DI++E YE+
Sbjct:    4 EIPTKGILKSEALKQYIMETSAYPREHELLKELRKATVQKYGNLSEMEVPVDEGHFLSMLVKIMNAKNTIEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEV 108          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.256e-26
Identity = 60/101 (59.41%), Postives = 79/101 (78.22%), Query Frame = 2
Query:  101 KSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNV--MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            K +LQS+AL QYI ETS YP E E +KELRE T K   ++  M+   DEG+FL+MLLKL+NAK T+E+GV+TGYSLL+TALALP+DG++ A+D +R  YE+
Sbjct:    8 KGILQSEALKQYIYETSAYPGEHEQLKELREATTKKYGSLSGMSVPVDEGRFLSMLLKLMNAKRTLEVGVFTGYSLLSTALALPEDGQVTAIDKDRGAYEI 108          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.095e-25
Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 2
Query:  101 KSLLQSDALYQYILETSVYPREAESMKELRELTAKHPWNV--MTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            K +L+S+AL QYI+ET+ YPRE E +KELRE T +   N+  M    DE  FL+ML+K++NAKNT+EIGV+TGYSL   ALALP+DG+I A+DI++  Y L
Sbjct:    8 KGILKSEALKQYIMETTAYPREHELLKELREATIQRYGNLSEMGVPVDESLFLSMLVKIINAKNTIEIGVFTGYSLFTVALALPEDGRITAIDIDQAGYNL 108          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CMTD1_HUMAN (Catechol-O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.491e-11
Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  113 QSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEL 397
            +   L+QY+L  S+  RE  +++ LR LT + P      + ++ Q L  L +L+ AK  +++G +TGYS LA ALALP DG+++  +++ +  EL
Sbjct:   50 EDSRLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPEL 142          
BLAST of CX289092 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.338e-11
Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 2
Query:  113 QSDALYQYILETSVYPREAESMKELRELTAKHPWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRE 385
            + + L+QY+L  S+  RE  +++ LR LT + P      + ++ Q L  L +L+ AK  +++G +TGYS LA ALALP+ G+++  +++ E
Sbjct:   50 EDNPLWQYLLSRSM--REHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPEAGRVVTCEVDAE 138          
The following BLAST results are available for this feature:
BLAST of CX289092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
CAMT2_MAIZE5.242e-4980.34Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT_PINTA1.168e-4887.62Caffeoyl-CoA O-methyltransferase OS=Pinus taeda GN... [more]
CAMT_CITNA4.154e-4689.11Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT3_ARATH3.195e-3060.61Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT_STELP2.290e-2859.22Caffeoyl-CoA O-methyltransferase OS=Stellaria long... [more]
CAMT1_ARATH2.991e-2859.05Putative caffeoyl-CoA O-methyltransferase At1g6798... [more]
CAMT_POPKI1.256e-2659.41Caffeoyl-CoA O-methyltransferase OS=Populus kitaka... [more]
CAMT2_ARATH3.095e-2556.44Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
CMTD1_HUMAN1.491e-1135.79Catechol-O-methyltransferase domain-containing pro... [more]
CMTD1_MOUSE4.338e-1135.16Catechol-O-methyltransferase domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionC02009A08SK IF1 Citrus clementina cDNA clone C02009A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289092 ID=CX289092; Name=CX289092; organism=Citrus clementina; type=EST; length=397bp
AAACTCCAAAATCCAACATCAAAAGAAAAGACTTGCGTCAATGGCTTCCA
ACGCAGAAGATCAACAAAACCAACAAGGCGGACACAAGGAAGTTGGCCAC
AAGAGCCTGCTCCAATCCGATGCCCTCTACCAGTATATTCTTGAAACCAG
TGTGTACCCAAGAGAGGCTGAATCAATGAAGGAGCTTAGAGAATTGACTG
CCAAACATCCATGGAACGTTATGACAACGTCGGCAGACGAAGGGCAGTTC
TTGAACATGCTGTTGAAGCTGGTCAATGCAAAGAACACAATGGAGATTGG
AGTCTACACAGGCTACTCTCTTTTGGCCACTGCCCTTGCCCTTCCTGATG
ACGGAAAGATTTTGGCCATGGACATCAACAGAGAAAATTATGAATTG
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