CX289101
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.130e-17 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KLLLIGDSGVGK+CL++R KIRT++++GK+IKLQ+WDTAGQERF+TITTAY Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAY 77
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.088e-17 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 LIKLLL+GDSGVGKSCLLLR KI+ +++DGK +KLQIWDTAGQERFRTIT+AY Sbjct: 13 LIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAY 82
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.088e-17 Identity = 46/70 (65.71%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KLLLIGDS VGKSCLLLR KIRTIE DGK IKLQIWDTAGQERFRTIT++Y Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSY 77
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.088e-17 Identity = 46/70 (65.71%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KLLLIGDSGVGKSCLLLR KI+TIELDGK IKLQIWDTAGQERF TIT++Y Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSY 77
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.339e-17 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 ++K+LLIGDSGVGKSCLL+R KI+T++++GK++KLQ+WDTAGQERFRTITTAY Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAY 89
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.339e-17 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 ++K+LLIGDSGVGKSCLL+R KI+T++++GK++KLQ+WDTAGQERFRTITTAY Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAY 89
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.973e-17 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KLLLIGDSGVGK+CL++R +IRT++++GK+IKLQ+WDTAGQERF+TITTAY Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAY 77
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.189e-16 Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 212 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 K+LLIGDSGVGKSCLLLR KI+T+ LDGK IKLQIWDTAGQERFRTIT++Y Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSY 79
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.029e-16 Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAGQERF TITT+Y Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78
BLAST of CX289101 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.029e-16 Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 206 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 415 L KLLLIGDSGVGK+C+L R KI+T+EL GK+IKLQIWDTAGQERF TITT+Y Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 78 The following BLAST results are available for this feature:
BLAST of CX289101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289101 ID=CX289101; Name=CX289101; organism=Citrus clementina; type=EST; length=417bpback to top |