CX289111

Overview
NameCX289111
Unique NameCX289111
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length226
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289111 vs. ExPASy Swiss-Prot
Match: RL31_CAEEL (60S ribosomal protein L31 OS=Caenorhabditis elegans GN=rpl-31 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.616e-19
Identity = 45/71 (63.38%), Postives = 58/71 (81.69%), Query Frame = 3 
Query:   12 EVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKRVRVRIA 224
            EVVTRE+TI++H R+ G   KK+AP+AI EI+KFA+  M T DVRVD KLNK IWS+GI++VP RVRVR++
Sbjct:   15 EVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLS 85
The following BLAST results are available for this feature:
BLAST of CX289111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL31_CAEEL2.616e-1963.3860S ribosomal protein L31 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionC02009C05SK IF1 Citrus clementina cDNA clone C02009C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289111 ID=CX289111; Name=CX289111; organism=Citrus clementina; type=EST; length=226bp
GACGAAAGGAGGAGGTGGTGACCAGAGAGTTCACCATCAACCTTCACAAG
CGTCTACATGGCTGTACATTCAAGAAGAAAGCTCCAAAAGCCATTAAGGA
GATCAGGAAATTTGCAGAGAAAGCTATGGGCACTAAGGATGTTAGGGTTG
ATGTCAAATTGAACAAGCAAATCTGGAGCAGGGGCATCCGAAGTGTCCCA
AAGAGGGTTAGGGTTCGCATTGCTCG
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