CX289127

Overview
NameCX289127
Unique NameCX289127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length493
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_RHOPS (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain BisB5) GN=katG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 53/127 (41.73%), Postives = 63/127 (49.61%), Query Frame = 1
Query:  130 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP------PQEGRLPDAK-QGNDHLRQVFGA-QMGL 480
            LM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADLY L G V +E  G     F  GR D  EP      P+   L D +  G   L    GA QMGL
Sbjct:   91 LMIRMAWHSAGTYRTTDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNKISWADLYVLTGNVALESMGFKTFGFAGGRADTWEPEELFWGPEGSWLGDERYSGERQLHDALGAVQMGL 217          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_BORA1 (Catalase-peroxidase OS=Bordetella avium (strain 197N) GN=katG PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 1
Query:  127 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAK 432
            PL +R+AWHSAGTY V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  G     F  GR+D  EP Q+    D K
Sbjct:   84 PLFIRMAWHSAGTYRVGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGNKISWADLFILTGNVALETMGFKTFGFGGGREDTWEPDQDVYWGDEK 187          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_ACIBL (Catalase-peroxidase OS=Acidobacteria bacterium (strain Ellin345) GN=katG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 52/129 (40.31%), Postives = 66/129 (51.16%), Query Frame = 1
Query:  127 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------EGRLPDAKQ--GNDHLRQVFGA-QMGL 480
            P  +R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG V +E  G     F  GR+D  EP +      EG+  D K+  G   L    GA QMGL
Sbjct:  104 PFFIRMAWHSAGTYRIGDGRGGAGSGEQRFAPLNSWPDNGNLDKARRLLWPIKQKYGRKLSWADLMVLAGNVALESMGFKTFGFAGGREDVWEPSEDIYWGPEGKWLDDKRYSGERDLENPLGAVQMGL 232          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_STRGG (Catalase-peroxidase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=katG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 52/132 (39.39%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  118 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL 480
            N  PLM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADL  L G V +E  G     F  GR+D  E        P+   L D +  G+  L    GA QMGL
Sbjct:  111 NYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLLILTGNVALETMGFKTFGFAGGREDVWESEEDVYWGPETTWLDDERYTGDRELENPLGAVQMGL 242          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_NOCFA (Catalase-peroxidase OS=Nocardia farcinica GN=katG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query:  118 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE 411
            N  PLM+R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR D  EP ++
Sbjct:   96 NYGPLMIRMAWHSAGTYRSSDGRGGANTGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQNISWADLMILAGNVALETMGFKTFGFAGGRVDVWEPEED 195          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_STRRE (Catalase-peroxidase OS=Streptomyces reticuli GN=katG PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 53/132 (40.15%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  118 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAK-QGNDHLRQVFGA-QMGL 480
            N  PLM+R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++  +IS+ADL  L G V +E  G     F  GR D  E        P+   L D +  G+  L    GA QMGL
Sbjct:   98 NYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQSISWADLLILTGNVALETMGFKTFGFGGGRADVWEAEEDVYWGPETTWLDDRRYTGDRELENPLGAVQMGL 229          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_JANSC (Catalase-peroxidase OS=Jannaschia sp. (strain CCS1) GN=katG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 42/97 (43.30%), Postives = 54/97 (55.67%), Query Frame = 1
Query:  127 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE 411
            PLM+R+AWHSAGTY      GG   GT R A   +   N  LD A R+L P KE++  ++S+ADL  L G V +E  G     F  GR D  EP ++
Sbjct:   93 PLMIRLAWHSAGTYRTYDGRGGAGTGTQRFAPLNSWPDNGNLDKARRILWPIKEKYGKSLSWADLLILVGNVALEDMGFETFGFAGGRADVWEPEED 189          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 1
Query:  127 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP 402
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  GGP   F  GR D  EP
Sbjct:   95 PFFIRMAWHAAGTYRTGDGRGGSSSGQQRFAPLNSWPDNGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEP 188          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  127 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE 411
            PL++R+AWHSAGTY ++   GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR D  EP ++
Sbjct:   81 PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEED 177          
BLAST of CX289127 vs. ExPASy Swiss-Prot
Match: KATG_RHOBA (Catalase-peroxidase OS=Rhodopirellula baltica GN=katG PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 51/129 (39.53%), Postives = 64/129 (49.61%), Query Frame = 1
Query:  127 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAKQGNDHLRQ--VFGAQMGL 480
            PL +R+AWHSAGTY V    GG   GT R A   +   N  LD A RLL P K+++ + IS+ADL  L G   +E  G     F  GR+D  EP       P+   L D +   D   Q  +   QMGL
Sbjct:  200 PLFIRMAWHSAGTYRVSDGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNCALEDMGFETFGFAGGREDVWEPQKDVYWGPETEWLGDKRYSGDRDLQNPLAAVQMGL 328          
The following BLAST results are available for this feature:
BLAST of CX289127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
KATG_RHOPS2.359e-1141.73Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]
KATG_BORA12.359e-1143.27Catalase-peroxidase OS=Bordetella avium (strain 19... [more]
KATG_ACIBL2.359e-1140.31Catalase-peroxidase OS=Acidobacteria bacterium (st... [more]
KATG_STRGG3.081e-1139.39Catalase-peroxidase OS=Streptomyces griseus subsp.... [more]
KATG_NOCFA3.081e-1144.00Catalase-peroxidase OS=Nocardia farcinica GN=katG ... [more]
KATG_STRRE4.024e-1140.15Catalase-peroxidase OS=Streptomyces reticuli GN=ka... [more]
KATG_JANSC4.024e-1143.30Catalase-peroxidase OS=Jannaschia sp. (strain CCS1... [more]
KATG_ERYLH4.024e-1143.62Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]
KATG_SYMTH5.256e-1144.33Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_RHOBA5.256e-1139.53Catalase-peroxidase OS=Rhodopirellula baltica GN=k... [more]

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Properties
Property NameValue
Genbank descriptionC02009E02SK IF1 Citrus clementina cDNA clone C02009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289127 ID=CX289127; Name=CX289127; organism=Citrus clementina; type=EST; length=493bp
TTTCTCATTTCATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGT
TAGCGAGGATTACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAG
GCTTCATCGCTGAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGG
CACTCAGCTGGTACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGG
AACCATGAGGCTCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCG
ATATTGCCGTTAGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATC
TCCTACGCTGACCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTAC
CGGTGGGCCCGATATCCCCTTCCACCCGGGAAGAGATGACAAGGCTGAGC
CACCTCAAGAAGGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTG
AGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATA
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