CX289162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ALCBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=clpX PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.563e-35 Identity = 76/168 (45.24%), Postives = 108/168 (64.29%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I ER + IGF A V++ T L + LV V+ DLV YGLIPEFIGR P++ +L L+ED L+Q+LTEP+NAL +QY ++F M V+L F +DAL+ IA KAM + TGARGLR++LE++L + M+++P + SV V++D + P Sbjct: 253 FAGLDKVIRERSEKGGIGFSAEVKSKDNTRNLGELLV------DVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPRNALTKQYARLFEMEGVELDFREDALKAIANKAMVRKTGARGLRSILESVLLDTMYQVPSME----SVAKVVIDSPTIKGESEP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHEON (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella oneidensis GN=clpX PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35 Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L+EPKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIP----SIDGVVKAVVDESVVNGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_METPB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=clpX PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35 Identity = 80/178 (44.94%), Postives = 115/178 (64.61%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD 535 F GLE+ IS+R + +SIGFGA V+A D T + SV+ DL+ +GLIPEF+GR P+L +L L+E+ L ++L EPKNAL +QY+++F M NV+L F D+AL L+A+KA+ + TGARGLR++LE IL + M+++P G SV V++ E V P +HGD Sbjct: 250 FAGLERIISQRGKGTSIGFGASVQA-------PDDRRTGEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEMENVELTFQDEALGLVARKAIERKTGARGLRSILETILLDTMYDLP----GLDSVEQVVIGPEVVDGKSKP----LFIHGD 412
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ACICJ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidiphilium cryptum (strain JF-5) GN=clpX PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35 Identity = 82/184 (44.57%), Postives = 117/184 (63.59%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVR--ANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELE 547 F GLEK I++R + S IGFGA VR RTG ++L V+ DL+ +GLIPEFIGR P++ +L L+E L+++LT+PKNAL +QY ++F M VKL+FT+DAL+++A +A+ + TGARGLR+++ENIL E MF++P G SV V+++ G V LHG E Sbjct: 249 FAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG---------AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFEMEGVKLNFTEDALKVVAARAIQRKTGARGLRSIMENILLETMFDLP----GLDSVEEVVIN----GEVAEGRANPLFLHGKERAE 415
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SILPO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Silicibacter pomeroyi GN=clpX PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.371e-35 Identity = 76/168 (45.24%), Postives = 115/168 (68.45%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I++R + S++GFGA VRA+ G L ++ DL+ +GLIPEF+GR P+L +L L+ED LV +LT+PKNAL +QY+++F + + +L FTDDAL+ IAK+A+ + TGARGLR+++E+IL + MF++P +V V+V++EAV S P Sbjct: 253 FAGLDKIIAQRGKGSAMGFGADVRASDERG-------VGELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFELEDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLP----SMDNVTKVVVNEEAVTSDAQP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHESW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella sp. (strain W3-18-1) GN=clpX PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.371e-35 Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L++PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E+IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIP----SVDGVVKAVVDESVVNGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SHEPC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=clpX PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.371e-35 Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 FVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I +R S IGFGA V+ G D S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L++PKNAL +QY +F M V+L F +DAL+ IA KAM++ TGARGLR+++E+IL + M++IP V +VD+ V AP Sbjct: 252 FAGLEKVIEQRAHVGSGIGFGAQVK------GEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDIP----SVDGVVKAVVDESVVNGESAP 410
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_MAGSA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=clpX PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.371e-35 Identity = 75/162 (46.30%), Postives = 111/162 (68.52%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAV 487 F GLEK I R + +SIGFGA VR D T +L V+ DL+ +GLIPEF+GR P+L +L L+ D L+ +L++PKNAL +QY+++F M + +L F+DDAL+ IA+KA+A+ TGARGLR+++E IL + MF++P G +V+ V+++KE V Sbjct: 250 FAGLEKIIGSRGRGTSIGFGADVRG-------PDERRTGEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFEMEDTRLAFSDDALKAIAEKAIARKTGARGLRSIMETILLDTMFDLP----GLDAVDEVVINKEVV 400
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_CLOTE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Clostridium tetani GN=clpX PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.371e-35 Identity = 75/164 (45.73%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGS 493 F G++K I R ++SS+GFGA +++ LL+ + DL+ +GLIPEFIGR PI V+LSAL+ D LV++LTEPKNAL +QYKK+F M+NV L F ++AL+ IA++A+ ++TGARGLR+++E I+ + MFEIP + S++ V++++E V + Sbjct: 249 FDGVDKLIERRTRNSSLGFGADIKSKRDEN-------VGELLKKIMPEDLLKFGLIPEFIGRLPITVTLSALDRDALVEILTEPKNALVKQYKKLFEMDNVHLEFKEEALKAIAEEAIRRSTGARGLRSIIEEIMKDIMFEIPSDE----SISKVIINEETVSN 401
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPY (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409 The following BLAST results are available for this feature:
BLAST of CX289162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289162 ID=CX289162; Name=CX289162; organism=Citrus clementina; type=EST; length=579bpback to top |