CX289162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis (strain Pestoides F) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis bv. Antiqua (strain Angola) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPE (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_YERP3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 78/169 (46.15%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 FVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R S IGFGA V+ G ++ LL V+ DL+ +GLIPEFIGR P++ +LS L+ED L+Q+L EPKNAL +QY+ +FS+ V+L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P SV V+VD+ + AP Sbjct: 251 FAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDLP----SMDSVEKVVVDESVIAGQSAP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SINMW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 79/170 (46.47%), Postives = 114/170 (67.06%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K IS R + +SIGFGA VRA + R G +L ++ DLV +GLIPEFIGR P+L +L L+ED L+Q+L+EPKNAL +QY+++F M +V+L+F +DALR IA++A+ + TGARGLR+++E IL + MFE+P + V V++ +E V P Sbjct: 253 FAGLDKIISARGEKTSIGFGATVRAPEDRRVG---------EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTLE----GVREVVISEEVVKGTARP 409
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_SILST (ATP-dependent Clp protease ATP-binding subunit clpX OS=Silicibacter sp. (strain TM1040) GN=clpX PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GL+K I +R + S++GFGA VR G ++ DL+ +GLIPEF+GR P+L +L L+ED L+ +LT+PKNAL +QY+++F + + +L FTD+AL IAKKA+ + TGARGLR++LE+IL + MFE+P G SV V+V++EAV S P Sbjct: 251 FAGLDKIIKQRGKGSAMGFGADVREESDAG-------VGETFRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLRSILEDILLDTMFELP----GMESVTKVVVNEEAVCSEAQP 407
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_RHOSK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=clpX PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 79/168 (47.02%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505 F GLEK I++R + S IGFGA V+ DA L + ++ DL+ +GLIPEF+GR P++ +L+ L+E LV +LTEPKNAL +QY+++F + VKL FT DAL IAK+A+ + TGARGLR+++E+IL + MFE+P G V V+V++EAV S P Sbjct: 249 FAGLEKIIAQRGKGSGIGFGAEVKD-------PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFELP----GLEGVEEVVVNEEAVNSGAKP 405 The following BLAST results are available for this feature:
BLAST of CX289162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289162 ID=CX289162; Name=CX289162; organism=Citrus clementina; type=EST; length=579bpback to top |