CX289162

Overview
NameCX289162
Unique NameCX289162
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACCZ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain ZK / E33L) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACCQ (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain Q1) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACC7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain AH187) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACC3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain 03BB102) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACC1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain ATCC 10987) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACC0 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus cereus (strain AH820) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACAN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus anthracis GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACAC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_BACAA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bacillus anthracis (strain A0248) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 68/168 (40.48%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAP 505
            F G+E  I  R  +  IGFG+      +   + +  V S +L      DL+ +GLIPEFIGR P++ +L  L+ED LV +LT+PKNAL +Q++K+  +++V+L F + AL  IAKKA+ + TGARGLR+++E ++ E MFE+P  K     +   ++ KE V    AP
Sbjct:  248 FDGIEPIIKRRLGEKVIGFGS----EKKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK----DIEKCILTKETVADNAAP 403
[Close]
BLAST of CX289162 vs. ExPASy Swiss-Prot
Match: CLPX_ANAMM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Anaplasma marginale (strain St. Maries) GN=clpX PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 69/158 (43.67%), Postives = 102/158 (64.56%), Query Frame = 2 
Query:    2 FVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVD 475
            F GLEK I  R + S +GF A V+       + D      +L   +  DLV +GLIPEF+GR P++ SL  L+E+ L ++L EPKN+L +QY K+F M+N++L F + AL  +AKKA+A+NTGARGLRA++E++L + MF     + G   V+A +V+
Sbjct:  244 FDGLEKIIEARNRGSCMGFEANVQK------IADK--RKDILCYTEPEDLVKFGLIPEFVGRIPVVTSLGRLDEETLYRILVEPKNSLVKQYTKLFEMDNLELKFDNAALLAVAKKAVARNTGARGLRAIMESLLLDFMFNPLGCEGGKVVVDAAMVE 393
The following BLAST results are available for this feature:
BLAST of CX289162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_BACCZ6.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACCQ6.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC76.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC36.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC16.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACC06.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACAN6.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACAC6.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_BACAA6.760e-2840.48ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_ANAMM6.760e-2843.67ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionC02009H05SK IF1 Citrus clementina cDNA clone C02009H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289162 ID=CX289162; Name=CX289162; organism=Citrus clementina; type=EST; length=579bp
CTTTGTTGGTTTGGAGAAGACAATTTCAGAGAGACGGCAAGATTCTTCTA
TTGGCTTTGGAGCACCAGTCCGTGCAAACATGAGAACTGGTGGATTGACT
GATGCGCTTGTGACGTCATCATTGTTGGAATCAGTAGATAGTGGTGATCT
TGTAGCATATGGCCTCATTCCTGAATTCATTGGACGGTTTCCGATTTTAG
TGAGCTTGTCAGCTTTAAATGAGGATCAACTTGTTCAGGTTCTCACGGAG
CCCAAAAATGCTCTTGGTAGACAGTACAAGAAGATGTTCAGCATGAATAA
TGTCAAACTGCATTTTACTGATGATGCATTGCGATTGATTGCAAAGAAAG
CAATGGCAAAAAACACTGGTGCTCGGGGTCTAAGAGCCTTATTAGAAAAT
ATTCTAACAGAGGCAATGTTTGAGATTCCGGAAACCAAGATTGGAACTTC
AAGTGTAAATGCAGTATTGGTCGACAAGGAGGCCGTTGGATCAGTGGATG
CACCTGGATGTGGTGCAAAAATTCTTCATGGAGATGGTGAATTGGAACGA
GTTCTCCATGAAACAAAGTCAAAGGATTT
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