CX289170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.326e-13 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 337 GGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.326e-13 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 348 GGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYR 400
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13 Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYGI N + H+I THV HHLF +PHYH ++ATKA K +LG YY+ Sbjct: 282 GGLTTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYR 334
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.261e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP++G+YY+ Sbjct: 358 GGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYR 410
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.953e-13 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L TVDRDYG +N V H+I THV HHLF +PHYH +EATK+ K +LG+YY+ Sbjct: 278 GGLTTVDRDYGWINNVHHDI-GTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYR 330
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13 Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L TVDRDYG + + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 281 GGLTTVDRDYGWIYNIHHDI-GTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYR 333
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.857e-13 Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+ G+YY+ Sbjct: 352 GGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYR 404
BLAST of CX289170 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.038e-13 Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 3 Query: 3 GALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 164 G L T+DRDYGI N + H+I THV HHLF +PHYH ++AT+A K +LG YY+ Sbjct: 279 GGLTTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYR 331 The following BLAST results are available for this feature:
BLAST of CX289170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289170 ID=CX289170; Name=CX289170; organism=Citrus clementina; type=EST; length=433bpback to top |