CX289173

Overview
NameCX289173
Unique NameCX289173
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length613
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 8.112e-54
Identity = 105/153 (68.63%), Postives = 117/153 (76.47%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVS-KSKSK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            +DY +PPP P F+  EL+ WS YRA IAEFVAT LFLYITVLTV+G   +S +K     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG   VK FQ S Y+  GGGAN L+ GY+ G
Sbjct:   14 RDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTG 166          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.360e-53
Identity = 100/153 (65.36%), Postives = 117/153 (76.47%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            KDY +PPP PLF+  EL  WSFYRA IAEF+AT LFLY+T++TV+G         +  +C+ VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK++L RAV YM+ QCLGAICG A+VK FQ + +   GGGAN LS GYS G
Sbjct:   15 KDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIG 167          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.083e-53
Identity = 104/153 (67.97%), Postives = 116/153 (75.82%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVS-KSKSK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            +DY +PPP P F+  EL+ WS YRA IAEFVAT LFLY+TVLTV+G   +S +K     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG   VK FQ S Y   GGGAN L+ GY+ G
Sbjct:   14 RDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTG 166          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.026e-53
Identity = 102/155 (65.81%), Postives = 117/155 (75.48%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            +DY +PPPAPL +  EL  WS YRA IAEFVAT LFLY+TV TV+G        V+ + + C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVT GLFLARK+SL RA+ YM  QCLGAICG A+VKGFQ S Y+  GGGAN L+ GYS G
Sbjct:   16 RDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTG 170          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.026e-53
Identity = 104/153 (67.97%), Postives = 112/153 (73.20%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK------CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            +DY +PPPAP  +  EL  WSFYRA IAEFVAT LFLYITVLTV+G             C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+I QCLGAICG   VK FQ S Y   GGGAN L+ GYS G
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTG 168          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.171e-52
Identity = 101/161 (62.73%), Postives = 118/161 (73.29%), Query Frame = 1
Query:  148 TAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            T  ++   KDY +PPP   FE  EL  WSFYRA IAEF+AT LFLY+TVLTV+G      ++     C++VG+ GI+WAFGGMIF LVYCTAGISGGHINPAVTFGLFLA K+SL RAV YM+ QCLGA CG  +VK FQ + Y   GGGANMLS GY+ G
Sbjct:    7 TEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVG 167          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.998e-52
Identity = 105/155 (67.74%), Postives = 114/155 (73.55%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMG--------VSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            +DY +PPPAPL +  EL  WS YRA IAEFVAT LFLYITV TV+G         S   + CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YM  Q LGAICG A+VKGFQ   Y   GGGAN +S GYS G
Sbjct:   18 RDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTG 172          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.922e-51
Identity = 98/153 (64.05%), Postives = 110/153 (71.90%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK------CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612
            +DY +PPPAP F+  EL  W  YRA IAEFVAT LFLY+++LTV+G             C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVT GLFLARK+SL R V Y++ QCLGAICG   VK FQ S Y   GGGAN L+ GY+KG
Sbjct:   16 RDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKG 168          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.638e-46
Identity = 86/146 (58.90%), Postives = 105/146 (71.92%), Query Frame = 1
Query:  178 YTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSK---CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYS 606
            Y +PPPAPL +  EL  WS YRA IAEF+AT +FLY+++ TV+G    ++    C+ VG  G+AW+FG  IF LVYCT G+SGGHINPAVT GLF  RKLSL R V Y++ QCLGAI GA +VKG  K  Y+ LGGGAN +S GYS
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYS 168          
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.695e-43
Identity = 87/148 (58.78%), Postives = 105/148 (70.95%), Query Frame = 1
Query:  172 KDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQ-KSQYEMLGGGANMLSKGYSKG 612
            KDY +PPPAPL + GEL  WS YRA IAEF AT L + I+V TV+G  K +S     G+ GIAWAFGG+IF LVYCTAGISGGH+NPAVTF + LAR++SL RA  Y + QC+GA+CGA + +      QY   GGGAN L+ GYS G
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIG-EKRQSGEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAG 158          
The following BLAST results are available for this feature:
BLAST of CX289173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PIP22_ARATH8.112e-5468.63Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP25_ARATH2.360e-5365.36Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH3.083e-5367.97Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP24_ORYSJ4.026e-5365.81Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP21_ARATH4.026e-5367.97Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP26_ARATH1.171e-5262.73Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP26_MAIZE1.998e-5267.74Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP24_ARATH4.922e-5164.05Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ1.638e-4658.90Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ1.695e-4358.78Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC02010A06SK IF1 Citrus clementina cDNA clone C02010A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289173 ID=CX289173; Name=CX289173; organism=Citrus clementina; type=EST; length=613bp
AATGGCACGAGGCATTTATTGATTCAATTCACTCCCAAGAAACTTGAACC
TATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGAGG
ATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAACC
GCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCGCC
GCTCTTTGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGGCA
TTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAACA
GTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATCCA
GGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTGCA
CTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGCTG
TTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATAAT
GCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCAGA
AAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGC
TACAGCAAGGGAG
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