CX289173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 211 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 540 PGELS +A +AEF++ +F++ + M SK T G+ + A +F V A ISGGH+NPAVTFG F+ +SL +AV Y + Q LG++ ++K Sbjct: 11 PGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLK 122
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.021e-12 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKG 543 E+ S +F +A AEF+AT +F++ + + + K + I IA AFG I L +SGGHINPA+T L + ++SL RA FY+ Q +GAI GA ++ G Sbjct: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG 107
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 241 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 540 RA +AEF++T LF++ V + + +K S + T G+ IA G +F V A ISGGH+NPAVTFGL + ++++ VFY I Q LG+ ++K Sbjct: 19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK 120
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12 Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S SF+RA AEF AT +++ + S + + + +A AFG + LV ISG H+NPAVTF + ++SL RA YM Q LGA+ GAAV+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL 104
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S SF+RA AEF AT +++ +G S + + + +A AFG + LV ISG H+NPAVTF + ++SL RA YM Q LGA+ GAAV+ Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL 104
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.503e-12 Identity = 46/124 (37.10%), Postives = 58/124 (46.77%), Query Frame = 1 Query: 235 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQG------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM 588 F+R G AEF+ T VL V GV + T G G AW FG M+ VY GISGGH+NPAVT L + RK + Y+ Q GA G A+ G+ S GG ++ Sbjct: 309 FFREGFAEFLGTL------VLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLG--VYIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDI 424
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.503e-12 Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 241 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK 540 RA I+EF+AT +F++ +++ + K ST G + ++ A + V ISGGH+NPA+TFG L +LSL RA+FY + Q LGA+ +++ Sbjct: 27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLR 127
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.503e-12 Identity = 44/136 (32.35%), Postives = 71/136 (52.21%), Query Frame = 1 Query: 211 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG 612 P E + +AG+AEF++TF+F++ + + +K + + G+ + A +F V A ISGGH+NPAVTFG F+ ++L R + Y+I Q LG+I +A++ S G LS+G G Sbjct: 11 PQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVG 141
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.881e-12 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S +F RA +AEF+AT LF++ + + + ++ + IA AFG I LV +SG HINPAVT + +S RAVFY+ Q LGA+ GAA++ Sbjct: 3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL 104
BLAST of CX289173 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.881e-12 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 1 Query: 217 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVV 537 EL S +F RA +AEF+AT LF++ + + + ++ + IA AFG I LV +SG HINPAVT + +S RAVFY+ Q LGA+ GAA++ Sbjct: 3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL 104 The following BLAST results are available for this feature:
BLAST of CX289173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289173 ID=CX289173; Name=CX289173; organism=Citrus clementina; type=EST; length=613bpback to top |