CX289225

Overview
NameCX289225
Unique NameCX289225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length389
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.071e-41
Identity = 82/126 (65.08%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RNT IPTK++Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+
Sbjct:  408 TAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDE 533          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.071e-41
Identity = 83/129 (64.34%), Postives = 96/129 (74.42%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            TVGGVMTKLIPRNTVIPTKKSQ+F+T  D Q TV+IQVFEGER +TKD   LGKFDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTGK   I I  +  R++             F+++DK+VK
Sbjct:  427 TVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEVTFEIDVNGILRVSAEDKGTGKKSNIVINKETNRITPEEIERMIQDAEKFSDQDKQVK 555          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 1.399e-41
Identity = 85/127 (66.93%), Postives = 97/127 (76.38%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMT LI RNT IPTKK+Q+FTT +D+Q  V IQVFEGER++TKD  LLGKF L+GI PAPRG PQIEVTF++DANGILNV A DK TGKSE +TITNDKGRLSQ            + EED+K
Sbjct:  406 TAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEK 532          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 1.399e-41
Identity = 85/127 (66.93%), Postives = 97/127 (76.38%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMT LI RNT IPTKK+Q+FTT +D+Q  V IQVFEGER++TKD  LLGKF L+GI PAPRG PQIEVTF++DANGILNV A DK TGKSE +TITNDKGRLSQ            + EED+K
Sbjct:  406 TAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEK 532          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.399e-41
Identity = 82/126 (65.08%), Postives = 96/126 (76.19%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDK 380
            T GGVMT LI RNT IPTK++Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+
Sbjct:  408 TAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKDDIDRMVQEAEKYKAEDE 533          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.399e-41
Identity = 83/129 (64.34%), Postives = 101/129 (78.29%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            TVGGVMT ++PRNT+IP KK+Q F+T+ D Q+ V IQV+EGER++TKD  LLGKF+L+GIPPAPRGTPQIEV+F+VD+NGILNV AEDK T K EKITITNDKGRLS             F E+D++ K
Sbjct:  406 TVGGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQIEVSFDVDSNGILNVTAEDKTTKKVEKITITNDKGRLSLKDITKMVEDAEKFKEQDQQQK 534          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.827e-41
Identity = 84/127 (66.14%), Postives = 98/127 (77.17%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKK 383
            T GGVMTKLI RN+ IP K++Q+F+TY D Q  VSIQVFEGER++TKD  LLG+FDLSGIPPAPRG PQIEVTF++DANGILNV A++K TGK + ITI NDKGRLSQ            F EED+K
Sbjct:  404 TAGGVMTKLIERNSRIPCKQTQIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKEKSTGKEKNITIKNDKGRLSQADIDRMVSEAEKFREEDEK 530          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 1.827e-41
Identity = 82/108 (75.93%), Postives = 90/108 (83.33%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQ 326
            T GGVMT LI RNT IPTK SQ FTTY D Q  V IQV+EGER++TKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A+DK TGK  KITITNDKGRLS+
Sbjct:  162 TAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSK 269          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.386e-41
Identity = 82/108 (75.93%), Postives = 90/108 (83.33%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQ 326
            T GGVMT LI RNT IPTK S+ FTTY D Q  V IQV+EGER+LTKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A+DK TGK  KITITNDKGRLS+
Sbjct:  404 TAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSK 511          
BLAST of CX289225 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 3.117e-41
Identity = 88/130 (67.69%), Postives = 97/130 (74.62%), Query Frame = 3
Query:    3 TVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDK-GTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVK 389
            T GGVMTKLI RNT IPT+KSQ+F+T  D Q TV IQV+EGER+LTKD  LLGKFDL GIPPAPRG PQIEVTFEVDANG+L V A DK G GK EK+ I NDKGRLS+            FAEEDK +K
Sbjct:  432 TTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILK 561          
The following BLAST results are available for this feature:
BLAST of CX289225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_BOVIN1.071e-4165.08Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
GRP78_ECHGR1.071e-4164.3478 kDa glucose-regulated protein OS=Echinococcus g... [more]
HSP70_THEPA1.399e-4166.93Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_THEAN1.399e-4166.93Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_CHICK1.399e-4165.08Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HS7C3_DICDI1.399e-4164.34Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP74_ANOAL1.827e-4166.14Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_ONCVO1.827e-4175.93Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP70_BRUMA2.386e-4175.93Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
GRP78_SCHPO3.117e-4167.6978 kDa glucose-regulated protein homolog OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionC02010F02SK IF1 Citrus clementina cDNA clone C02010F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289225 ID=CX289225; Name=CX289225; organism=Citrus clementina; type=EST; length=389bp
AGACAGTTGGTGGGGTGATGACCAAGTTGATCCCAAGAAACACGGTCATT
CCAACCAAGAAATCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTAC
AGTTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCA
GATTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGA
ACCCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAA
TGTAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCA
CAAATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGT
GAGGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAG
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