CX289240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289240 vs. ExPASy Swiss-Prot
Match: RLP24_YEAST (Ribosome biogenesis protein RLP24 OS=Saccharomyces cerevisiae GN=RLP24 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11 Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 2 Query: 41 CKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVK--KKRRATKKPYSRSIVGATLEVIQK 304 C F + YPG GI F+R+D++ F F SKC + F R P KL WT +RK K++A ++ +RR Y+R +V TL+ + + Sbjct: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMAR 95
BLAST of CX289240 vs. ExPASy Swiss-Prot
Match: RLP24_PONAB (Probable ribosome biogenesis protein RLP24 OS=Pongo abelii GN=RSL24D1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.163e-11 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 26 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDA 337 ++ E C F IYPG G+ F+R+D +VF F SKC + F R P K+ WT +RK K++ + +KRR Y R + T++ + KR E + R A Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKRRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAM-KRVEEIKQKRQA 105
BLAST of CX289240 vs. ExPASy Swiss-Prot
Match: RLP24_RAT (Probable ribosome biogenesis protein RLP24 OS=Rattus norvegicus GN=Rsl24d1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11 Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 26 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAR 343 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ + +R E+ + R A+ Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAM--KRVEEIKQRRQAK 106
BLAST of CX289240 vs. ExPASy Swiss-Prot
Match: RLP24_MOUSE (Probable ribosome biogenesis protein RLP24 OS=Mus musculus GN=Rsl24d1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11 Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 26 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDA 337 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ + KR E + R A Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAM-KRVEEIKQKRQA 105
BLAST of CX289240 vs. ExPASy Swiss-Prot
Match: RLP24_BOVIN (Probable ribosome biogenesis protein RLP24 OS=Bos taurus GN=RSL24D1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11 Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 26 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDA 337 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ + KR E + R A Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAM-KRVEEIKQKRQA 105
BLAST of CX289240 vs. ExPASy Swiss-Prot
Match: RLP24_HUMAN (Probable ribosome biogenesis protein RLP24 OS=Homo sapiens GN=RSL24D1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11 Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 26 LKTELCKFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAE--AVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDA 337 ++ E C F IYPG G+ F+R+D +VF F SKC + F + P K+ WT +RK K++ + +KRR Y R + T++ + KR E + R A Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAM-KRVEEIKQKRQA 105 The following BLAST results are available for this feature:
BLAST of CX289240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289240 ID=CX289240; Name=CX289240; organism=Citrus clementina; type=EST; length=452bpback to top |