CX289327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM1_BACCR (Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.450e-22 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 377 + FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYYL Y+N +PDY+ WNV++W A YQ+ Sbjct: 99 TFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNNG--ELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQE 216
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.450e-22 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 377 + FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYYL Y+N +PDY+ WNV++W A YQ+ Sbjct: 84 TFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNNG--ELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYYLNYQNRRPDYIGAFWNVVDWNAAEKRYQE 201
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.506e-22 Identity = 49/116 (42.24%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 350 ++FW +L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD +++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW Sbjct: 83 TLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSEGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVINW 191
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 377 S FW L P +G +G AI FGS E + A GSGW WL +D E +L V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 83 SQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 377 S FW L P +G +G AI FGS E + A GSGW WL +D E +L V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 83 SQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.004e-21 Identity = 50/120 (41.67%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 362 ++FW L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y++ WNV+NW A+ Sbjct: 83 TLFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEAN 195
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.004e-21 Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL---VPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 374 S FWK + G P+ + AI+ FGS++ + K +A A GSGW WL + + L +++T NQD PL+T P + +PLLG+DVWEHAYYL+Y+N +P+Y+ WNV+NW+ ++ Y+ Sbjct: 85 SFFWKVMTNPSNTNG--PNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKPDGS-LSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWNVVNWEQVAENYK 209
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21 Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 3 SIFWKNLAPVH--EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDT--EFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 374 S+FWKNLAP E SL I+ +GS + + SA +QGSGW WL ++ E RL + TT +QDP+V VP+ G+D+WEHAYYLQY N K Y++NIW V+NWK A + +Q Sbjct: 107 SLFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKESTAEKGRLRIITTKDQDPVVGGE---VPVFGVDMWEHAYYLQYLNGKAAYVENIWKVINWKTAEERFQ 231
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 380 S+FWK+L G +L AI+ FGS++A + A GSGW WL L E K VV T +PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 84 SLFWKSLKK-----GTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207
BLAST of CX289327 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.236e-21 Identity = 50/120 (41.67%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 3 SIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 362 ++FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW A+ Sbjct: 83 TLFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVVNWDEAN 195 The following BLAST results are available for this feature:
BLAST of CX289327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 206
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289327 ID=CX289327; Name=CX289327; organism=Citrus clementina; type=EST; length=593bpback to top |