CX289331

Overview
NameCX289331
Unique NameCX289331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length576
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_MYCHP (Cell division protein ftsY homolog OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=ftsY PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15
Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 289
            DTAGRLQ    +M+EL  + RVL       P E LLV+DA TGQ        F     +TG ILTK+DG S+GG  L++K+  G  +K +G GE+++DL  F
Sbjct:  235 DTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATTGQNGVIQARVFKESTPLTGIILTKMDGTSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEF 336          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_RICFE (Cell division protein ftsY homolog OS=Rickettsia felis GN=ftsY PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 325
            DTAGRL   K +MDEL  + +V+       PT  +LV+DA+TGQ     V  FN    +TG I+TKLDG ++ G  + V +    P+  +G GE++EDL+ F     A  ++G+
Sbjct:  190 DTAGRLHNKKNLMDELSKIVKVIKKLDENAPTHSVLVIDAITGQNTYNQVEHFNDATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFNRHDFAKSLVGL 303          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_RICBR (Cell division protein ftsY homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsY PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 325
            DTAGRL   K +MDEL  + +V+       PT  +LV+DA+TGQ     V  FN    +TG I+TKLDG ++ G  + V +    PI  +G GE++EDL+ F     A  ++G+
Sbjct:  190 DTAGRLHNKKNLMDELTKIVKVIKKVDENLPTHSVLVIDAITGQNTYNQVEHFNDATNLTGLIVTKLDGSAKAGVIVGVVQRFNLPIYFIGIGEQIEDLKIFNRHDFAKSLVGL 303          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_RICTY (Cell division protein ftsY homolog OS=Rickettsia typhi GN=ftsY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.487e-14
Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 325
            DTAGRL  +K +MDEL  + +V+       PT  +L++DA+TGQ     +  FN    +TG I+TKLDG ++ G  +   +    PI  +G GE++EDL+ F     +  ++G+
Sbjct:  190 DTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAVTGQNTYNQIEYFNDVTNLTGLIITKLDGSAKAGVLVGAVQKFNLPIYFIGIGEQIEDLKIFNRHDFSRSLVGL 303          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_RICPR (Cell division protein ftsY homolog OS=Rickettsia prowazekii GN=ftsY PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.166e-14
Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGM 325
            DTAGRL  +K +MDEL  + +V+       PT  +L++DA+TGQ     +  FN    +TG I+TKLDG ++ G  +   +    P+  +G GE++EDL+ F     +  ++G+
Sbjct:  190 DTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAITGQNTYNQIEYFNDVTNLTGLIVTKLDGSAKAGVLVGAVQKFNLPVYFIGIGEKIEDLKIFNRHDFSRSLVGL 303          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_MYCGE (Cell division protein ftsY homolog OS=Mycoplasma genitalium GN=ftsY PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.166e-14
Identity = 39/102 (38.24%), Postives = 62/102 (60.78%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 289
            DT+GRLQ    +M+EL+ + +++       P+E LLV+D   GQ   +    FN    +TG +LTK+DG ++GG  L++K++   P+KL+G GE+  DL  F
Sbjct:  225 DTSGRLQNKLNLMNELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNEFSKLTGIVLTKMDGSAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIF 326          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_BUCAI (Cell division protein ftsY homolog OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsY PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.035e-12
Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 289
            DTAGRL     +++ELK + RV+       P E LL++D+  GQ        F+  + +TG I+TKLDG ++GG   S+ +    PI+ +G GE+M+DL  F
Sbjct:  266 DTAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIFHKALNLTGIIITKLDGTAKGGVVFSLADQFQIPIRYIGIGEKMQDLGHF 367          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_BUCBP (Cell division protein ftsY homolog OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsY PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.765e-12
Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLNPT------EVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 319
            DTAGRL     +M+ELK +KRV++        E +LV+DA  GQ +   V  F+  + +TG ++TKLD  ++GG   S+ +    P++ +  GE  ED++ F  +     IL
Sbjct:  280 DTAGRLHNKNNLMEELKKIKRVIHKIDSTISQETMLVLDACIGQNSIKQVKIFHESLNVTGLVITKLDSTAKGGVIFSIAQEFLIPVRYISFGEDFEDIQVFNSNIFVNAIL 391          
BLAST of CX289331 vs. ExPASy Swiss-Prot
Match: FTSY_BUCAP (Cell division protein ftsY homolog OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsY PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 2
Query:    2 DTAGRLQIDKAMMDELKDVKRVLN------PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 289
            DTAGRL     +++ELK + RV+       P E++L++DA  GQ        F+  I +TG ++TKLDG ++GG   S+      PI+ +G GE+  DL  F
Sbjct:  238 DTAGRLHNKLHLLEELKKMVRVIKKLNLSAPHEIMLIIDACNGQNTIKQTEMFHKAINLTGLVITKLDGTAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVF 339          
The following BLAST results are available for this feature:
BLAST of CX289331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
FTSY_MYCHP8.465e-1544.12Cell division protein ftsY homolog OS=Mycoplasma h... [more]
FTSY_RICFE1.106e-1438.60Cell division protein ftsY homolog OS=Rickettsia f... [more]
FTSY_RICBR1.886e-1439.47Cell division protein ftsY homolog OS=Rickettsia b... [more]
FTSY_RICTY5.487e-1435.96Cell division protein ftsY homolog OS=Rickettsia t... [more]
FTSY_RICPR7.166e-1435.09Cell division protein ftsY homolog OS=Rickettsia p... [more]
FTSY_MYCGE7.166e-1438.24Cell division protein ftsY homolog OS=Mycoplasma g... [more]
FTSY_BUCAI1.035e-1238.24Cell division protein ftsY homolog OS=Buchnera aph... [more]
FTSY_BUCBP1.765e-1234.82Cell division protein ftsY homolog OS=Buchnera aph... [more]
FTSY_BUCAP8.760e-1237.25Cell division protein ftsY homolog OS=Buchnera aph... [more]

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Properties
Property NameValue
Genbank descriptionC02011G08SK IF1 Citrus clementina cDNA clone C02011G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289331 ID=CX289331; Name=CX289331; organism=Citrus clementina; type=EST; length=576bp
AGATACTGCTGGAAGGCTTCAGATAGATAAAGCAATGATGGATGAGTTGA
AAGATGTGAAGCGTGTACTGAATCCTACTGAGGTTTTGCTAGTTGTGGAT
GCAATGACTGGCCAAGAAGCTGCAGCCCTGGTCACAACATTCAACATTGA
GATAGGGATTACAGGTGCCATTTTGACAAAGTTAGATGGAGATTCTAGGG
GTGGTGCGGCTTTGAGTGTTAAAGAGGTATCAGGAAAGCCAATCAAACTT
GTTGGACGAGGAGAACGAATGGAGGACCTTGAACCTTTCTACCCAGATCG
CATGGCTGGACGTATCTTAGGAATGGGAGATGTTCTCTCATTTGTAGAGA
AGGCACAAGAAGTTATGCAACAAGAAGATGCTGAAGAAATGCAAAAGAAG
ATAATGAGTGCGAATTTTGACTTCAATGATTTCTTAAAGCAAACCCGTAC
TGTTGCACGTATGGGTTCGATGAGTCGTGTTATAGGAATGATCCCTGGAA
TGGGGAAGATTACTCCTGCACAAGTTCGAGAAGCAGAGAAGAGTTTAAAA
ATAATGGAAGCAATGATCGAAGCAAT
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