CX289337

Overview
NameCX289337
Unique NameCX289337
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK7_ARATH (Mitogen-activated protein kinase 7 OS=Arabidopsis thaliana GN=MPK7 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.678e-42
Identity = 80/129 (62.02%), Postives = 103/129 (79.84%), Query Frame = 2
Query:  194 GVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G+   G  Y  Y+++  LFE+  KYVP I+P+GRGAYG+VC+++N ET E VAIKKI N F+NR+DA RTLRE+KLLRH+ HEN+IA+KD++ P  R +F DVY+VYELMDTDLHQII+S Q L+DDHC
Sbjct:   10 GIKQQGKHY--YSMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNERVAIKKIHNVFENRVDALRTLRELKLLRHVRHENVIALKDVMLPANRSSFKDVYLVYELMDTDLHQIIKSSQSLSDDHC 135          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.862e-42
Identity = 81/123 (65.85%), Postives = 103/123 (83.74%), Query Frame = 2
Query:  212 GRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G+Y  Y+++  LFE+  KYVP I+P+GRGAYGIVC+++N ET E+VAIKKI N FDNR+DA RTLRE+KLLRH+ HEN+IA+KDI+ P  R +F DVY+VYELMDTDLHQII+S Q L++DHC
Sbjct:   15 GKYY-YSMWQTLFEIDTKYVP-IKPIGRGAYGIVCSSINRETNEKVAIKKIHNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSPQGLSNDHC 135          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.375e-42
Identity = 81/129 (62.79%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  194 GVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G+   G  Y  Y ++  LFE+  KYVP I+P+GRGAYGIVC+++N  T E+VAIKKI N FDNR+DA RTLRE+KLLRH+ HEN+IA+KDI+ P  R +F DVY+VYELMDTDLHQII+S Q L++DHC
Sbjct:   10 GMGNQGKHY--YTMWQTLFEIDTKYVP-IKPIGRGAYGIVCSSINRATNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKSSQPLSNDHC 135          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK14_ARATH (Mitogen-activated protein kinase 14 OS=Arabidopsis thaliana GN=MPK14 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.132e-41
Identity = 79/129 (61.24%), Postives = 103/129 (79.84%), Query Frame = 2
Query:  194 GVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G+   G  Y  Y ++  LFE+  KYVP I+P+GRGAYG+VC+++NSET E VAIKKI N F+NRIDA RTLRE+KLLRH+ HEN+I++KD++ P  R +F DVY+VYELMD+DL+QII+S Q L+DDHC
Sbjct:   10 GIRQEGKHY--YTMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINSETNERVAIKKIHNVFENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKSSQSLSDDHC 135          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 2.679e-40
Identity = 76/129 (58.91%), Postives = 105/129 (81.40%), Query Frame = 2
Query:  194 GVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G+   G  Y  ++++  LFE+  KY+P I+P+GRGAYG+VC+++NS+T E+VAIKKI N ++NRIDA RTLRE+KLLRH+ HEN+IA+KD++ P  + +F DVY+VYELMDTDLHQII+S Q L++DHC
Sbjct:   10 GIRNEGKHY--FSMWQTLFEIDTKYMP-IKPIGRGAYGVVCSSVNSDTNEKVAIKKIHNVYENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHKMSFKDVYLVYELMDTDLHQIIKSSQVLSNDHC 135          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK2_ARATH (Mitogen-activated protein kinase 2 OS=Arabidopsis thaliana GN=MPK2 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.736e-39
Identity = 75/129 (58.14%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  194 GVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G+   G  Y  ++++  LFE+  KYVP I+P+GRGAYG+VC+++N E+ E VAIKKI N F+NRIDA RTLRE+KLLRH+ HEN++A+KD++    + +F DVY+VYELMDTDLHQII+S Q L++DHC
Sbjct:   10 GIRNQGKHY--FSMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSVNRESNERVAIKKIHNVFENRIDALRTLRELKLLRHLRHENVVALKDVMMANHKRSFKDVYLVYELMDTDLHQIIKSSQVLSNDHC 135          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: ERK1_DICDI (Extracellular signal-regulated kinase 1 OS=Dictyostelium discoideum GN=erkA PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.165e-35
Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 2
Query:  221 VQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            + Y VYG+ F V R+Y   ++ +G GAYG+VC+A ++ T E+VAIKKI  AFDN  D KRTLREI LLRH  HEN+I+IKDI++P  +E F DVYIV ELMDTDLHQII S Q L+DDHC
Sbjct:  134 ISYFVYGSQFTVPRRY-SIVKCIGHGAYGVVCSAKDNLTGEKVAIKKISKAFDNLKDTKRTLREIHLLRHFKHENLISIKDILKPNSKEQFEDVYIVSELMDTDLHQIITSPQPLSDDHC 252          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK7_ORYSJ (Mitogen-activated protein kinase 7 OS=Oryza sativa subsp. japonica GN=MPK7 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.882e-27
Identity = 54/97 (55.67%), Postives = 76/97 (78.35%), Query Frame = 2
Query:  287 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDH 577
            VG+G+YG+VC+A++  T ++VAIKKI N F++  DA R LREIKLLR + H +I+ IK I+ PP R  F D+Y+V+ELMDTDLHQ+I+++ DLT +H
Sbjct:   19 VGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEH 115          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK8_ORYSJ (Mitogen-activated protein kinase 8 OS=Oryza sativa subsp. japonica GN=MPK8 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.291e-26
Identity = 53/97 (54.64%), Postives = 76/97 (78.35%), Query Frame = 2
Query:  287 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDH 577
            +G+G+YG+VC+A++  T ++VAIKKI N F++  DA R LREIKLLR + H +I+ IK I+ PP R  F D+Y+V+ELMDTDLHQ+I+++ DLT +H
Sbjct:   19 IGKGSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEH 115          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK9_ORYSJ (Mitogen-activated protein kinase 9 OS=Oryza sativa subsp. japonica GN=MPK9 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.904e-26
Identity = 51/97 (52.58%), Postives = 77/97 (79.38%), Query Frame = 2
Query:  287 VGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDH 577
            +G+G+YG+VC+A++  TR++VAIKK+ N F++  DA R LREIKLLR + H +I+ IK I+ PP R  F D+Y+V+ELM++DLHQ+I+++ DLT +H
Sbjct:  113 IGKGSYGVVCSAIDLHTRQKVAIKKVHNIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEH 209          
The following BLAST results are available for this feature:
BLAST of CX289337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MPK7_ARATH1.678e-4262.02Mitogen-activated protein kinase 7 OS=Arabidopsis ... [more]
MPK3_ORYSJ2.862e-4265.85Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]
MPK4_ORYSJ6.375e-4262.79Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
MPK14_ARATH4.132e-4161.24Mitogen-activated protein kinase 14 OS=Arabidopsis... [more]
MPK1_ARATH2.679e-4058.91Mitogen-activated protein kinase 1 OS=Arabidopsis ... [more]
MPK2_ARATH1.736e-3958.14Mitogen-activated protein kinase 2 OS=Arabidopsis ... [more]
ERK1_DICDI1.165e-3561.67Extracellular signal-regulated kinase 1 OS=Dictyos... [more]
MPK7_ORYSJ9.882e-2755.67Mitogen-activated protein kinase 7 OS=Oryza sativa... [more]
MPK8_ORYSJ1.291e-2654.64Mitogen-activated protein kinase 8 OS=Oryza sativa... [more]
MPK9_ORYSJ4.904e-2652.58Mitogen-activated protein kinase 9 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC02011H02SK IF1 Citrus clementina cDNA clone C02011H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289337 ID=CX289337; Name=CX289337; organism=Citrus clementina; type=EST; length=580bp
TGTCAAAGCCCTTTCCACCTACCGACACGCCCTCCTAAAATTTAGTAGCT
CTTTCCTCGAAATTGGTTCTCCTTCTCGTTCCAATTTTCAGGAAAAATCC
TTGTCGGGTTCGGATTCGGATACCGTATTCGGGGCCAACAGAATCATGTC
AGGAGAGTCGAGCTCCGGTTCGGGTGATCATACTATTGTCAAAGGAGTTC
CGACTCATGGGGGACGTTACGTGCAGTATAATGTGTACGGTAACCTTTTC
GAAGTTTCTAGAAAGTATGTCCCTCCTATACGCCCCGTTGGCAGAGGCGC
TTATGGTATTGTGTGTGCTGCTATGAATTCGGAGACTCGGGAAGAGGTTG
CCATTAAGAAAATTGGCAATGCATTTGATAATAGAATTGATGCCAAGAGG
ACTTTGCGAGAAATTAAGCTGCTTCGTCACATGGATCATGAAAATATTAT
TGCCATCAAAGACATCATACGACCACCACAGAGGGAGACCTTCAATGATG
TATACATAGTTTATGAATTGATGGACACTGATCTCCATCAAATCATCCGT
TCCCATCAAGATCTGACAGATGATCATTGT
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