CX289353

Overview
NameCX289353
Unique NameCX289353
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length370
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: MRCKA_HUMAN (Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 1
Query:   10 KNHLKFPEEAR-LTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGS-GPMRKTMLTPKDLSFVGYTYKNFEAVKDK 363
            K   +FP +   ++  AKDLI RL+C  EHRLG  G E  K HP+F  I WD +   EA Y PEV+   DT NF    +V+    K + +  P   T  +   L FVG+TY +   + D+
Sbjct:  298 KERFQFPAQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNF----DVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSSCVLSDR 413          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: COT1_NEUCR (Serine/threonine-protein kinase cot-1 OS=Neurospora crassa GN=cot-1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.461e-14
Identity = 38/125 (30.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVE---------SQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFE 348
            V+W++ L FP++  L  +A++LI  L+C+ E+RLG  G+ +IK+H +F+ + +D L  + A ++P +   +DT  +   DE++         +Q   R  + P ++       L F+GYT+K F+
Sbjct:  471 VNWRHSLYFPDDITLGVDAENLIRSLICNTENRLGRGGAHEIKSHAFFRGVEFDSLRRIRAPFEPRLTSAIDT-TYFPTDEIDQTDNATLLKAQQAARGAAAPAQQEESPELSLPFIGYTFKRFD 594          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ROCK2_BOVIN (Rho-associated protein kinase 2 OS=Bos taurus GN=ROCK2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.061e-13
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   10 KNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIA--WDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTY 336
            KN L FPE+A ++  AK+LIC  L D E RLG  G E+IK HP+FK+    WD + E  A   PE++  +D+ N   FD++E        + P+ K  +    L F+G+TY
Sbjct:  310 KNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSN---FDDIEDDKGD-VETFPIPKAFV-GNQLPFIGFTY 415          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: LATS2_MOUSE (Serine/threonine-protein kinase LATS2 OS=Mus musculus GN=Lats2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12
Identity = 40/123 (32.52%), Postives = 70/123 (56.91%), Query Frame = 1
Query:    1 VHWKNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDK-LYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRK---TMLTPK----DLSFVGYTYKNF 345
            ++W++ L  P + RL+ EA+DLI +L C  + RLG  G++ +KAHP+F  I + + + +  A Y P ++  +DT N   FD V+ ++P    SG   K   T+ +P     + +F  +T++ F
Sbjct:  884 INWESTLHIPTQVRLSAEARDLITKLCCAADCRLGRDGADDLKAHPFFNTIDFSRDIRKQPAPYVPTISHPMDTSN---FDPVDEESPWHEASGESAKAWDTLASPSSKHPEHAFYEFTFRRF 1003          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ROCK2_HUMAN (Rho-associated protein kinase 2 OS=Homo sapiens GN=ROCK2 PE=1 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12
Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   10 KNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIA--WDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTY 336
            KN L FPE+A ++  AK+LIC  L D E RLG  G E+I+ HP+FK+    WD + E  A   PE++  +D+ N   FD++E        + P+ K  +    L F+G+TY
Sbjct:  310 KNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIRQHPFFKNDQWHWDNIRETAAPVVPELSSDIDSSN---FDDIEDDKGD-VETFPIPKAFV-GNQLPFIGFTY 415          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: MRCKG_HUMAN (Serine/threonine-protein kinase MRCK gamma OS=Homo sapiens GN=CDC42BPG PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12
Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   10 KNHLKFPEEARLTP-EAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGS-GPMRKTMLTPKDLSFVGYTY 336
            ++HL+FP +    P  A+DLI +LLC  E RLG  G +  + HP+F+ + W++L    A Y PE+ G +DT NF    +V+  T    G+  P      +   L FVG+TY
Sbjct:  292 EDHLQFPPDVPDVPASAQDLIRQLLCRQEERLGRGGLDDFRNHPFFEGVDWERLASSTAPYIPELRGPMDTSNF----DVDDDTLNHPGTLPPPSHGAFSGHHLPFVGFTY 398          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ROCK2_MOUSE (Rho-associated protein kinase 2 OS=Mus musculus GN=Rock2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 1
Query:   10 KNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIA--WDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTY 336
            KN L FPE+  ++  AK+LIC  L D E RLG  G E+IK HP+FK+    WD + E  A   PE++  +D+ N   FD++E        + P+ K  +    L F+G+TY
Sbjct:  310 KNSLCFPEDTEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSN---FDDIEDDKGD-VETFPIPKAFV-GNQLPFIGFTY 415          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: MRCKG_MOUSE (Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12
Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   10 KNHLKFPEEARLTP-EAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGS-GPMRKTMLTPKDLSFVGYTY 336
            ++HL+FP +    P  A+DLI +LLC  E RLG  G +  + HP+F+ + W++L    A Y PE+ G +DT NF    +V+  T  R  +  P      +   L FVG+TY
Sbjct:  292 EDHLQFPADVTDVPASAQDLIRQLLCRQEERLGRGGLDDFRKHPFFEGVDWERLATSTAPYIPELRGPMDTSNF----DVDDDTLNRPETLPPSSHGAFSGHHLPFVGFTY 398          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: MRCKB_HUMAN (Serine/threonine-protein kinase MRCK beta OS=Homo sapiens GN=CDC42BPB PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 41/121 (33.88%), Postives = 60/121 (49.59%), Query Frame = 1
Query:   10 KNHLKFPEEAR-LTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKDIAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTYKNFEAVKDKRS 369
            +   +FP     ++ EAKDLI RL+C  E RLG  G E  K H +F+ + W+ +  +EA Y P+V+   DT NF   D+V   T       P   T  +   L F+G+T+       D+ S
Sbjct:  297 EERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILP---PGSHTGFSGLHLPFIGFTFTTESCFSDRGS 414          
BLAST of CX289353 vs. ExPASy Swiss-Prot
Match: ROCK1_HUMAN (Rho-associated protein kinase 1 OS=Homo sapiens GN=ROCK1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   10 KNHLKFPEEARLTPEAKDLICRLLCDVEHRLGTLGSEQIKAHPWFKD--IAWDKLYEMEAAYKPEVNGVLDTQNFMKFDEVESQTPKRTGSGPMRKTMLTPKDLSFVGYTY 336
            KN L FP++  ++ EAK+LIC  L D E RLG  G E+IK H +FK+   AW+ L +  A   P+++  +DT NF   +E + +      + P+ K  +    L FVG+TY
Sbjct:  294 KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEE----TFPIPKAFV-GNQLPFVGFTY 399          
The following BLAST results are available for this feature:
BLAST of CX289353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
MRCKA_HUMAN1.443e-1438.33Serine/threonine-protein kinase MRCK alpha OS=Homo... [more]
COT1_NEUCR2.461e-1430.40Serine/threonine-protein kinase cot-1 OS=Neurospor... [more]
ROCK2_BOVIN6.061e-1339.64Rho-associated protein kinase 2 OS=Bos taurus GN=R... [more]
LATS2_MOUSE1.034e-1232.52Serine/threonine-protein kinase LATS2 OS=Mus muscu... [more]
ROCK2_HUMAN1.350e-1238.74Rho-associated protein kinase 2 OS=Homo sapiens GN... [more]
MRCKG_HUMAN1.350e-1236.94Serine/threonine-protein kinase MRCK gamma OS=Homo... [more]
ROCK2_MOUSE1.763e-1238.74Rho-associated protein kinase 2 OS=Mus musculus GN... [more]
MRCKG_MOUSE1.763e-1236.94Serine/threonine-protein kinase MRCK gamma OS=Mus ... [more]
MRCKB_HUMAN1.143e-1133.88Serine/threonine-protein kinase MRCK beta OS=Homo ... [more]
ROCK1_HUMAN1.493e-1137.84Rho-associated protein kinase 1 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionC02012A08SK IF1 Citrus clementina cDNA clone C02012A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289353 ID=CX289353; Name=CX289353; organism=Citrus clementina; type=EST; length=370bp
GTGCATTGGAAAAATCACTTGAAGTTTCCGGAGGAGGCAAGATTGACGCC
TGAAGCAAAGGATCTTATTTGTAGGTTGCTTTGTGATGTTGAGCATAGGC
TTGGAACTCTTGGGTCTGAGCAAATTAAAGCTCATCCTTGGTTCAAAGAT
ATTGCATGGGACAAACTCTATGAAATGGAAGCAGCATATAAACCAGAGGT
CAATGGTGTACTCGATACCCAAAACTTCATGAAATTTGATGAGGTGGAGT
CCCAAACACCAAAAAGAACAGGATCTGGACCCATGAGGAAGACGATGTTA
ACTCCTAAAGATCTCAGTTTTGTTGGGTACACATATAAGAATTTTGAGGC
TGTCAAAGATAAAAGGAGTA
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