CX289362

Overview
NameCX289362
Unique NameCX289362
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length242
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433T_HUMAN (14-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   49 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSI
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.245e-14
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 1
Query:   49 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            E+   +  A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSI
Sbjct:    2 EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433T_CHICK (14-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.228e-14
Identity = 35/56 (62.50%), Postives = 45/56 (80.36%), Query Frame = 1
Query:   73 ARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            A+LAEQAERYD+M   MK V +   EL+ EERNL+SV YKNV+G RR++WR++SSI
Sbjct:   10 AKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.610e-13
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   49 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            ER   +  A+LAEQAERY++M   MK   +   EL+ EERNL+SV YKNV+G +RA+WR+LSSI
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.610e-13
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   49 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            ER   +  A+LAEQAERY++M   MK   +   EL+ EERNL+SV YKNV+G +RA+WR+LSSI
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.610e-13
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   49 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            ER   +  A+LAEQAERY++M   MK   +   EL+ EERNL+SV YKNV+G +RA+WR+LSSI
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433S_HUMAN (14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.747e-13
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
Query:   49 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            ER   +  A+LAEQAERY++M   MK   +   EL+ EERNL+SV YKNV+G +RA+WR+LSSI
Sbjct:    2 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSI 65          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.685e-13
Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = 1
Query:   64 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 231
            V++A+LAEQAERYD+M  AMK+  +    L  EERNL+SV YKNV+GARR++WR++
Sbjct:   18 VHIAKLAEQAERYDDMAAAMKRYTEASGNLGNEERNLLSVAYKNVVGARRSAWRVI 73          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: U4976_SOYBN (UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.358e-11
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 1
Query:   46 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEER 168
            K+RE+ VY+A+LAEQAERY+EMVE+MK VA LDVELTVEER
Sbjct:    5 KDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEER 45          
The following BLAST results are available for this feature:
BLAST of CX289362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433T_HUMAN3.245e-1456.2514-3-3 protein theta OS=Homo sapiens GN=YWHAQ PE=1... [more]
1433T_BOVIN3.245e-1456.2514-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S... [more]
1433T_CHICK7.228e-1462.5014-3-3 protein theta OS=Gallus gallus GN=YWHAQ PE=... [more]
1433S_SHEEP1.610e-1356.2514-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_MOUSE1.610e-1356.2514-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]
1433S_BOVIN1.610e-1356.2514-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]
1433S_HUMAN2.747e-1356.2514-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 S... [more]
14331_SCHMA4.685e-1358.9314-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
U4976_SOYBN3.358e-1178.05UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC02012B08SK IF1 Citrus clementina cDNA clone C02012B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289362 ID=CX289362; Name=CX289362; organism=Citrus clementina; type=EST; length=242bp
AAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACGAAATGGAGAAGGA
GAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAGCAAGCCGAGAGAT
ACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAAGTTGGATGTGGAA
CTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGTACAAGAATGTGAT
TGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCCATTGA
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