CX289369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.386e-27 Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 82 LKLVSALVLCMLVTGPLSA-QAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPY 381 +KL ++ CM+V GP++A +A+TCG V ++APCI Y+ GG +P CC GV LN+ ARTTPDRQ AC CL+ AA ++ PNLN A G+P+ACGVS+P+ Sbjct: 5 MKLACLVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALGPNLNAGRAAGIPKACGVSVPF 106
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.386e-27 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 79 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYK 384 +LKL +VLCM+V PL+ A+T GQVT SLAPCI YLR G VP CC G++SLN+AA+TTP RQ AC C+K AA I +N A GLP CGV+IPYK Sbjct: 6 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYK 109
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.386e-27 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 79 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYK 384 +LKL +VLCM+V PL+ A+T GQVT SLAPCI YLR G VP CC G++SLN+AA+TTP RQ AC C+K AA I +N A GLP CGV+IPYK Sbjct: 2 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYK 105
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP1_TOBAC (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum GN=LTP1 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.772e-27 Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 1 Query: 85 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYK 384 K+ +VLCM+V P A+AITCGQVT +LAPC+ YLR+ GP+ CC GV++L +ARTT DRQ AC CLK AAG+I +N A GLP CGV+IPYK Sbjct: 6 KIACFVVLCMVVAAPC-AEAITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYK 103
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.667e-26 Identity = 55/103 (53.40%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 82 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGP-IPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYK 384 +KL + CM+V GP+++ A ++CG V+G +APCI YL P +P CC+GV SLN ARTTPDRQ AC CL AA ++P +N A GLP+ACGV+IPYK Sbjct: 5 MKLACLIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYK 107
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.272e-26 Identity = 59/101 (58.42%), Postives = 72/101 (71.29%), Query Frame = 1 Query: 91 VSALVLCM-LVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYK 384 V+ +V+ M L T P + +TCGQVTG+LAPC+ YLRS +PVP CCN VR LN AARTT D++TAC CLKQ A ++ LN N A GLP CGV+IPYK Sbjct: 9 VAMMVMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYK 109
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.272e-26 Identity = 53/103 (51.46%), Postives = 75/103 (72.82%), Query Frame = 1 Query: 82 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYK 384 +KL L+ CM+V GP+++ A ++CG V +LA CI Y+ GG IP CC+GV++LN+ A+TTPDRQ ACNC++ AA ++ LN A G+P+ACGV+IPYK Sbjct: 5 MKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYK 107
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.843e-25 Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 79 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPY 381 AL+ + LVL + + + A AI+CG V GSLAPC YL GG +P CC GV++LN+ A+TTPDRQ AC C++ A SI LNP+ A GLP CGVSIPY Sbjct: 4 ALRFFTCLVLTVCIVASVDA-AISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPY 103
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.843e-25 Identity = 57/104 (54.81%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 73 MAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPY 381 MA +LV ALV +L+ P +A AITCGQV ++ PC+ Y R G CC+GVRSL AAA TT DR+TACNCLK AA I LN NA +P CGVS+PY Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPY 104
BLAST of CX289369 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.843e-25 Identity = 57/104 (54.81%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 73 MAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPY 381 MA +LV ALV +L+ P +A AITCGQV ++ PC+ Y R G CC+GVRSL AAA TT DR+TACNCLK AA I LN NA +P CGVS+PY Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPY 104 The following BLAST results are available for this feature:
BLAST of CX289369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289369 ID=CX289369; Name=CX289369; organism=Citrus clementina; type=EST; length=384bpback to top |