CX289373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_YEAST (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae GN=DBP3 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 6.019e-37 Identity = 75/123 (60.98%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E L+ +G+ V AIHG +Q +RT++L+ FK G L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRTGRAG+ G +HT FT K LAG LVNVL A Q VP+ L+KFGTH K Sbjct: 375 VERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTK 497
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_YEAS7 (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP3 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.861e-37 Identity = 74/123 (60.16%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E L+ +G+ + AIHG +Q +RT++L+ FK G L++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRTGRAG+ G +HT FT K LAG LVNVL A Q VP+ L+KFGTH K Sbjct: 375 VERNLKYNGYNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTK 497
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_VANPO (ATP-dependent RNA helicase DBP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP3 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.027e-36 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E L +G+KV AIHG +Q +RT +L FK G +++ATDVAARGLDIP+V+ VIN +FPLT EDYVHRIGRTGRAGK G +HT FT K LAG LVNVL A Q VP+ L KFGTH K Sbjct: 382 VERNLNYNGYKVSAIHGDLSQQQRTNALDEFKTGRSSILLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGKTGTAHTLFTEQEKHLAGSLVNVLNGAGQPVPEELKKFGTHTK 504
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_ASPCL (ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus GN=dbp3 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.751e-36 Identity = 76/123 (61.79%), Postives = 91/123 (73.98%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E +LR +KV IHG QHER KSL FK G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRTGRAG +G + T FT +KA +G L+NVL+ A+Q VP LLKFGT VK Sbjct: 354 VERLLRNKNFKVAGIHGDLNQHERFKSLDAFKSGAATVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGRAITLFTETDKAQSGALINVLKAAKQEVPQELLKFGTTVK 476
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_ASPOR (ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae GN=dbp3 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.095e-36 Identity = 75/123 (60.98%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E +LR G+KV IHG +Q ER +SL FK G ++VATDVAARGLDIP V+ VIN +FPLT EDYVHRIGRTGRAG +G + T FT +KA +G L+NVLR A+Q +P+ LLKFGT VK Sbjct: 349 IERLLRTKGFKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGLDIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETDKAQSGALINVLRAAKQDIPEDLLKFGTTVK 471
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_SCHPO (ATP-dependent RNA helicase dbp3 OS=Schizosaccharomyces pombe GN=dbp3 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.655e-36 Identity = 76/123 (61.79%), Postives = 94/123 (76.42%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E L R + VV IHG +Q R ++L+ FK G CP++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRTGRA KG + TFFT +K+ AGELVNVLR+A+Q +P+ L KFGT VK Sbjct: 433 VEGTLARK-YNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIPEGLFKFGTAVK 554
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_EMENI (ATP-dependent RNA helicase dbp3 OS=Emericella nidulans GN=dbp3 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 8.691e-36 Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E +LR G+KV IHG +Q ER +SL FK G ++VATDVAARGLDIP V++V+N +FPLT EDYVHRIGRTGRAG G + T FT +KA +G L+NVL+ A Q VP+ALLKFG+ VK Sbjct: 339 VERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVLKAANQEVPEALLKFGSTVK 461
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_ASPNC (ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp3 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.639e-34 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E +L G+KV IHG Q ER KSL FK+G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRTGRAG +G + T FT +KA +G L+NVL+ A Q VP+ LLKFG VK Sbjct: 346 VERLLWNKGFKVAGIHGDLGQQERFKSLESFKKGVSTVLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTEVDKAQSGALINVLKAANQDVPEDLLKFGATVK 468
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: DBP3_ASPTN (ATP-dependent RNA helicase dbp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp3 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.769e-34 Identity = 73/123 (59.35%), Postives = 90/123 (73.17%), Query Frame = 3 Query: 3 LENMLRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDALLKFGTHVK 371 +E L+ G+KV IHG +Q ER +SL FK G ++VATDVAARGLDIP V++VIN +FPLT EDYVHRIGRTGRAG +G + T FT +KA +G L+NVL+ A Q VP+ LLKFG VK Sbjct: 344 IERFLQSRGFKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGLDIPAVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTETDKAQSGALINVLKAAGQEVPEELLKFGGTVK 466
BLAST of CX289373 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 2.367e-33 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 3 Query: 15 LRRSGWKVVAIHGKKAQHERTKSLSLFKEGTCPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYVHRIGRTGRAGKKGVSHTFFTNHNKALAGELVNVLREARQVVPDAL 347 LR GW +AIHG K Q ER + L+ FK G P+M ATDVAARGLD+ D++ V+NY FP T EDY+HRIGRTGRAG KG++ TFFT+ N A ELV +L+EA QVVP L Sbjct: 430 LRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTL 540 The following BLAST results are available for this feature:
BLAST of CX289373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289373 ID=CX289373; Name=CX289373; organism=Citrus clementina; type=EST; length=372bpback to top |