CX289378

Overview
NameCX289378
Unique NameCX289378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length359
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_STRAW (Adenosylhomocysteinase OS=Streptomyces avermitilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.150e-43
Identity = 84/114 (73.68%), Postives = 97/114 (85.09%), Query Frame = 3
Query:   18 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            +K+ ++   + GV+EETTTGV RLY+M  +GTLLFPAINVND+VTKSKFDN YGCRHSL DG+ RATDV+I GK AVVCGYGDVGKGCA +L+  GARVIVTEIDPICALQA M
Sbjct:  193 QKWTQLASEIRGVTEETTTGVHRLYEMHRDGTLLFPAINVNDAVTKSKFDNKYGCRHSLIDGINRATDVLIGGKTAVVCGYGDVGKGCAESLRGQGARVIVTEIDPICALQAAM 306          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.961e-43
Identity = 86/119 (72.27%), Postives = 98/119 (82.35%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LKA P  + K ++ + GV+EETTTGV RLYQ+ + G L FPAINVNDSVTKSKFDN YGC+ SL DG+ RATDVM+AGKVAVVCGYGDVGKG AA+L  AGARV VTE+DPICALQA M
Sbjct:  172 LKASPGWFTKQRDAIKGVTEETTTGVNRLYQLSQKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAM 290          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_PLAF7 (Adenosylhomocysteinase OS=Plasmodium falciparum (isolate 3D7) GN=PFE1050w PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 2.561e-43
Identity = 78/116 (67.24%), Postives = 100/116 (86.21%), Query Frame = 3
Query:   12 DPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            +PKK+  + ++++GVSEETTTGV RL +M +   LLF AINVND+VTK K+DN+YGCRHSLPDGLMRATD +I+GK+ V+CGYGDVGKGCA+++K  GARV +TEIDPICA+QA+M
Sbjct:  183 NPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVM 298          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.345e-43
Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 3
Query:   33 MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            M   + GV+EETTTGV RLY+M  +GTLLFPAINVND+VTKSKFDN YGCRHSL DG+ RATDV+I GK AVVCGYGDVGKGCA +L+  GARVI+TEIDPICALQA M
Sbjct:  182 MSSEIRGVTEETTTGVHRLYEMHRDGTLLFPAINVNDAVTKSKFDNKYGCRHSLIDGINRATDVLIGGKTAVVCGYGDVGKGCAESLRGQGARVIITEIDPICALQAAM 290          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.345e-43
Identity = 87/119 (73.11%), Postives = 97/119 (81.51%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L  DP  Y K  E + GV+EETTTGV RLYQ++++G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVM+AGKVAVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  172 LAIDPHWYSKRLEHIQGVTEETTTGVHRLYQLEKDGHLPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMVAGKVAVVLGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 290          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.369e-43
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LKA P  + K K  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TD M+AGKVAVVCGYGDVGKG +A+LK AGARV VTE+DPICALQA M
Sbjct:  172 LKASPGFFTKQKAAIRGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDTMMAGKVAVVCGYGDVGKGSSASLKGAGARVKVTEVDPICALQAAM 290          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.706e-43
Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 3
Query:   12 DPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            D +++H +   + GVSEETTTGV RLYQM E   LLFPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVM+AGKV VV GYGDVGKG A +++  GARVIVTEIDPICALQA M
Sbjct:  179 DSQRWHNVAAEMKGVSEETTTGVHRLYQMMEKEELLFPAINVNDSVTKSKFDNLYGCRESLADGIKRATDVMVAGKVVVVLGYGDVGKGSARSMRAYGARVIVTEIDPICALQAAM 294          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_AGRT5 (Adenosylhomocysteinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.706e-43
Identity = 87/119 (73.11%), Postives = 98/119 (82.35%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LKA P  + K ++ L GV+EETTTGV RLY + + G L FPAINVNDSVTKSKFDN YGC+ SL DG+ RATDVM+AGKVAVVCGYGDVGKG AA+L+ AGARV VTEIDPICALQA M
Sbjct:  172 LKASPGWFTKQRDALKGVTEETTTGVHRLYDLAKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRATDVMMAGKVAVVCGYGDVGKGSAASLQGAGARVKVTEIDPICALQAAM 290          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 7.452e-43
Identity = 87/119 (73.11%), Postives = 95/119 (79.83%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L ADP  Y      + GV+EETTTGV RLYQM++ G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LDADPTWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297          
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURPP (Adenosylhomocysteinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 7.452e-43
Identity = 87/119 (73.11%), Postives = 95/119 (79.83%), Query Frame = 3
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L ADP  Y      + GV+EETTTGV RLYQM++ G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LDADPTWYSTRLAHIQGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297          
The following BLAST results are available for this feature:
BLAST of CX289378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH_STRAW1.150e-4373.68Adenosylhomocysteinase OS=Streptomyces avermitilis... [more]
SAHH_AGRRK1.961e-4372.27Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_PLAF72.561e-4367.24Adenosylhomocysteinase OS=Plasmodium falciparum (i... [more]
SAHH_STRAZ3.345e-4376.15Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_CHRVO3.345e-4373.11Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_RHILO4.369e-4372.27Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]
SAHH_CHLPD5.706e-4373.28Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_AGRT55.706e-4373.11Adenosylhomocysteinase OS=Agrobacterium tumefacien... [more]
SAHH_BURXL7.452e-4373.11Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_BURPP7.452e-4373.11Adenosylhomocysteinase OS=Burkholderia phytofirman... [more]

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Properties
Property NameValue
Genbank descriptionC02012D05SK IF1 Citrus clementina cDNA clone C02012D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289378 ID=CX289378; Name=CX289378; organism=Citrus clementina; type=EST; length=359bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGCGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATG
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