CX289378

Overview
NameCX289378
Unique NameCX289378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length359
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BARHE (Adenosylhomocysteinase OS=Bartonella henselae GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.831e-42
Identity = 83/119 (69.75%), Postives = 97/119 (81.51%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            ++A P  + + +  + G+SEETTTGV RL+Q+Q+ G L FPAIN+NDSVTKSKFDN YGCR SL DG+ RATDVMIAGK A+VCGYGDVGKG AA+L  AGARV VTEIDPICALQA M
Sbjct:  171 MEATPGFFTRQRAAIKGISEETTTGVHRLHQLQKEGLLPFPAININDSVTKSKFDNKYGCRESLVDGIRRATDVMIAGKTAIVCGYGDVGKGSAASLSGAGARVKVTEIDPICALQAAM 289
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.831e-42
Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L +DP  Y      + GV+EETTTGV RLYQM E G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVM+AGKVAVVCGYGDVGKG A AL+   A+V VTEIDPICALQA M
Sbjct:  176 LASDPTWYSVRLAAIRGVTEETTTGVHRLYQMFERGELKFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMVAGKVAVVCGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAM 294
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 86/119 (72.27%), Postives = 92/119 (77.31%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L  D + + +M   L+GVSEETTTGV RLY M  NG LLFPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK  VV GYGDVGKGCA A K  GA V VTE+DPICALQA M
Sbjct:  178 LLVDAEYWQRMATGLLGVSEETTTGVHRLYHMARNGELLFPAFNVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKKCVVLGYGDVGKGCAQAFKGMGALVSVTEVDPICALQAAM 296
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 83/119 (69.75%), Postives = 96/119 (80.67%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L + P  Y +    + GV+EETTTGV RLY+M++ G L FPAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AV+CGYGDVGKGCA +L+  GA V +TEIDPICALQA M
Sbjct:  184 LTSHPGWYSRNLAGIRGVTEETTTGVHRLYEMEKKGELPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVICGYGDVGKGCAQSLRGLGATVWITEIDPICALQAAM 302
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURPS (Adenosylhomocysteinase OS=Burkholderia pseudomallei GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURP6 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 668) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURP1 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 1710b) GN=ahcY PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURP0 (Adenosylhomocysteinase OS=Burkholderia pseudomallei (strain 1106a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BURMS (Adenosylhomocysteinase OS=Burkholderia mallei (strain SAVP1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.309e-42
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ D   Y K    + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+  GA V VTEIDPICALQA M
Sbjct:  179 LEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAM 297
The following BLAST results are available for this feature:
BLAST of CX289378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH_BARHE4.831e-4269.75Adenosylhomocysteinase OS=Bartonella henselae GN=a... [more]
SAHH_AZOSE4.831e-4273.11Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_PELCD6.309e-4272.27Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_NITEC6.309e-4269.75Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_BURTA6.309e-4271.43Adenosylhomocysteinase OS=Burkholderia thailandens... [more]
SAHH_BURPS6.309e-4271.43Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP66.309e-4271.43Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP16.309e-4271.43Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURP06.309e-4271.43Adenosylhomocysteinase OS=Burkholderia pseudomalle... [more]
SAHH_BURMS6.309e-4271.43Adenosylhomocysteinase OS=Burkholderia mallei (str... [more]

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Properties
Property NameValue
Genbank descriptionC02012D05SK IF1 Citrus clementina cDNA clone C02012D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289378 ID=CX289378; Name=CX289378; organism=Citrus clementina; type=EST; length=359bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGCGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATG
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