CX289378

Overview
NameCX289378
Unique NameCX289378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length359
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.836e-41
Identity = 85/119 (71.43%), Postives = 93/119 (78.15%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L  DP  Y    E++ GV+EETTTGV RLYQM   G L FPAINVNDSVTKSKFDNLYGCR SL D + RATDVM+AGKVAVVCGYGDVGKG A AL+   A+V VTE+DPICALQA M
Sbjct:  180 LAQDPTWYSTRLEKVKGVTEETTTGVHRLYQMFAKGELKFPAINVNDSVTKSKFDNLYGCRESLVDAIKRATDVMVAGKVAVVCGYGDVGKGSAQALRALSAQVWVTEVDPICALQAAM 298
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_POLNS (Adenosylhomocysteinase OS=Polynucleobacter necessarius (strain STIR1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.836e-41
Identity = 85/119 (71.43%), Postives = 93/119 (78.15%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L  DP  Y    E++ GV+EETTTGV RLYQM   G L FPAINVNDSVTKSKFDNLYGCR SL D + RATDVM+AGKVAVVCGYGDVGKG A AL+   A+V VTE+DPICALQA M
Sbjct:  180 LAQDPTWYSTRLEKVKGVTEETTTGVHRLYQMFARGDLKFPAINVNDSVTKSKFDNLYGCRESLVDAIKRATDVMVAGKVAVVCGYGDVGKGSAQALRALSAQVWVTEVDPICALQAAM 298
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHHA_XENLA (Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy-A PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.836e-41
Identity = 84/113 (74.34%), Postives = 95/113 (84.07%), Query Frame = 3 
Query:   21 KYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            KY ++ + + G+SEETTTGV  LY+M+ +GTL  PAINVNDSVTKSKFDNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+  GARVI+TEIDPI ALQA M
Sbjct:  143 KYPQLLKGIKGISEETTTGVHNLYKMKSSGTLQVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRAFGARVIITEIDPINALQAAM 255
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_OCHA4 (Adenosylhomocysteinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 82/119 (68.91%), Postives = 96/119 (80.67%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + + ++ + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTRQRDAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSU (Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BRUSI (Adenosylhomocysteinase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BRUME (Adenosylhomocysteinase OS=Brucella melitensis GN=ahcY PE=3 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BRUMB (Adenosylhomocysteinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BRUC2 (Adenosylhomocysteinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_BRUAB (Adenosylhomocysteinase OS=Brucella abortus GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.397e-41
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            + A P  + K +  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+ R TDVM+AGKVAVVCGYGDVGKG A +L  AGARV VTE+DPICALQA M
Sbjct:  172 MAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM 290
The following BLAST results are available for this feature:
BLAST of CX289378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH_POLSQ1.836e-4171.43Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]
SAHH_POLNS1.836e-4171.43Adenosylhomocysteinase OS=Polynucleobacter necessa... [more]
SAHHA_XENLA1.836e-4174.34Adenosylhomocysteinase A OS=Xenopus laevis GN=ahcy... [more]
SAHH_OCHA42.397e-4168.91Adenosylhomocysteinase OS=Ochrobactrum anthropi (s... [more]
SAHH_BRUSU2.397e-4169.75Adenosylhomocysteinase OS=Brucella suis GN=ahcY PE... [more]
SAHH_BRUSI2.397e-4169.75Adenosylhomocysteinase OS=Brucella suis (strain AT... [more]
SAHH_BRUME2.397e-4169.75Adenosylhomocysteinase OS=Brucella melitensis GN=a... [more]
SAHH_BRUMB2.397e-4169.75Adenosylhomocysteinase OS=Brucella melitensis biot... [more]
SAHH_BRUC22.397e-4169.75Adenosylhomocysteinase OS=Brucella canis (strain A... [more]
SAHH_BRUAB2.397e-4169.75Adenosylhomocysteinase OS=Brucella abortus GN=ahcY... [more]

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Properties
Property NameValue
Genbank descriptionC02012D05SK IF1 Citrus clementina cDNA clone C02012D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289378 ID=CX289378; Name=CX289378; organism=Citrus clementina; type=EST; length=359bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGCGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATG
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