CX289387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_VACCA (Ribonucleoside-diphosphate reductase large subunit OS=Vaccinia virus (strain Ankara) GN=MVA065L PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A KEGPY+TY S S GI+Q D+WNV+PSD W+W LKD I GLRN L Sbjct: 538 ALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNWEPLKDKIRTYGLRNSL 596
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_DICDI (Ribonucleoside-diphosphate reductase large subunit OS=Dictyostelium discoideum GN=rnrA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.589e-13 Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKD-MISKNGLRNPL 182 AL S E+A ++G YE++ SP SKGI+Q DMWNV PS RW+W LKD +++K GLRN L Sbjct: 566 ALTASHELAIRDGTYESFKGSPASKGILQFDMWNVTPSSRWNWAELKDNIVNKGGLRNSL 625
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_NEUCR (Ribonucleoside-diphosphate reductase large chain OS=Neurospora crassa GN=rnr-1 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.075e-13 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL S ++A ++GPY TY SPVS+GI+Q DMWNV P++ WDW LK I K G+RN L Sbjct: 540 ALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDWTALKADIKKYGVRNSL 598
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_CRYPV (Ribonucleoside-diphosphate reductase large chain OS=Cryptosporidium parvum GN=RNR1 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.623e-13 Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIP-SDRWDWGVLKDMISKNGLRNPL 182 AL S E+A K GPYETY SP SKGI+Q DMW V P S DW +LKD ISK+G+RN L Sbjct: 538 ALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCDWDLLKDRISKHGIRNSL 597
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_CAEEL (Ribonucleoside-diphosphate reductase large subunit OS=Caenorhabditis elegans GN=rnr-1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.345e-12 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A GPY TY SPVSKG +Q DMW V P+D+ DW L+ I+K+G+RN L Sbjct: 545 ALEASCELAELNGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWATLRKKIAKHGIRNSL 603
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR3_YEAST (Ribonucleoside-diphosphate reductase large chain 2 OS=Saccharomyces cerevisiae GN=RNR3 PE=1 SV=4) HSP 1 Score: 69.707 bits (169), Expect = 5.111e-12 Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 9 LKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 L+ S E+A KEG Y T+ SP SKGI+Q DMWN P WDW L+ I K+GLRN L Sbjct: 544 LEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDWETLRKDIVKHGLRNSL 601
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_YEAST (Ribonucleoside-diphosphate reductase large chain 1 OS=Saccharomyces cerevisiae GN=RNR1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11 Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 +++ S E+A K+GPYET+ SP S+GI+Q DMW+ P WDW L+ I K+G+RN L Sbjct: 543 SMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDWDTLRKDIMKHGVRNSL 601
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_PLAF4 (Ribonucleoside-diphosphate reductase large subunit OS=Plasmodium falciparum (isolate Dd2) GN=RNR1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.327e-11 Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNV-IPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A+ GPYE+Y SP S+GI+Q DMWN + + WDW LK I K+GLRN L Sbjct: 538 ALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWDWDELKAKIRKHGLRNSL 597 The following BLAST results are available for this feature:
BLAST of CX289387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289387 ID=CX289387; Name=CX289387; organism=Citrus clementina; type=EST; length=183bpback to top |