CX289411

Overview
NameCX289411
Unique NameCX289411
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length395
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.175e-40
Identity = 77/120 (64.17%), Postives = 91/120 (75.83%), Query Frame = 1
Query:   25 NAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIKKGQN 384
            NA VV+ID YE+VP ++E++LQKAVANQPVSV ++  G  FQLY SGIFTG C  S +H +T VGYGTEN  D+WIVKNSWG +WGE GYIR ERN+     GKCGI   ASYP+KKG N
Sbjct:  103 NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENP-DGKCGITRFASYPVKKGTN 221          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.005e-40
Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 1
Query:    1 GSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIKKGQNPP 390
            G+CD  + N   V+ID +E+VP+NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG C T L+HGV  VGYGT  +G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM ASYPIK   + P
Sbjct:  222 GTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNIS-KKEGLCGIAMMASYPIKNSSDNP 351          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 162.155 bits (409), Expect = 7.617e-40
Identity = 80/131 (61.07%), Postives = 94/131 (71.76%), Query Frame = 1
Query:    1 GSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIK-KGQNPP 390
            G C+   +N K VTID YE+VP N+E ALQ AV  QPVSVA++  G AF+ Y SGIFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SYP+K   QN P
Sbjct:  222 GECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSYPVKYNNQNHP 350          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 9.948e-40
Identity = 80/131 (61.07%), Postives = 94/131 (71.76%), Query Frame = 1
Query:    1 GSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIK-KGQNPP 390
            G C+   +N K VTID YE+VP N+E ALQ AV  QPVSVA++  G AF+ Y SGIFTG CGT++DH VT VGYGTE G DYWIVKNSW ++WGE GY+R+ RNV G   G CGIA   SYP+K   QN P
Sbjct:  222 GECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG--AGTCGIATMPSYPVKYNNQNHP 350          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.299e-39
Identity = 78/125 (62.40%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 GSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIKK 375
            G+CDT ++NA VV+ID Y +VP NDEK+LQKAVANQPVSV ++  G  FQLY +GIFTG C  S +H  T  G  TEN  DYW VKNSWG +WGE GYIR+ERN+A + +GKCGIA+  SYPIK+
Sbjct:   96 GTCDT-KENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANHYRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAES-SGKCGIAISPSYPIKE 218          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 1.697e-39
Identity = 78/131 (59.54%), Postives = 93/131 (70.99%), Query Frame = 1
Query:    1 GSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIKKGQNPP 390
            G+CD  + N   V+ID +E+VP NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG C T L+HGV  VGYGT  +G +YWIV+NSWG  WGE GYIRM+RN++    G CGIAM  SYPIK   + P
Sbjct:  222 GTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNIS-KKEGLCGIAMLPSYPIKNSSDNP 351          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.937e-39
Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 1
Query:    1 GSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIK 372
            G CD   ++N K V ID YE++P NDE AL KAVA+QPV+  I+     FQLYESG+F G CGT+L+HGV  VGYGTENG DYW+VKNS G +WGE GY++M RN+A    G CGIAM ASYP+K
Sbjct:  230 GVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGSCGTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANP-RGLCGIAMRASYPLK 353          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.200e-38
Identity = 74/125 (59.20%), Postives = 92/125 (73.60%), Query Frame = 1
Query:    1 GSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIK 372
            G C+   +++ K V ID YE++P NDE AL KAVA+QPV+  ++     FQLYESG+F G CGT+L+HGV  VGYGTENG DYWIVKNS G +WGE GY++M RN+A    G CGIAM ASYP+K
Sbjct:  237 GVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANP-RGLCGIAMRASYPLK 360          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.129e-38
Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 1
Query:    1 GSCDTYR---KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIKKGQNP 387
            G+C+  R    +  VV ID ++DVP N E+ L +AVANQPVSVA+E  G AF  Y  G+FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASYP+K    P
Sbjct:  228 GTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASYPVKTYSKP 359          
BLAST of CX289411 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.216e-37
Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 1
Query:    1 GSCDTYR---KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYPIKKGQNP 387
            G+C+  R    +  VV ID ++DVP N E+ L +AVANQPVSVA+E  G AF  Y  G+FTG CGT LDHGV  VGYG  E+G  YW VKNSWG SWGE GYIR+E++ +G   G CGIAMEASYP+K    P
Sbjct:  228 GTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD-SGASGGLCGIAMEASYPVKTYNKP 359          
The following BLAST results are available for this feature:
BLAST of CX289411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CPGP2_ZINOF1.175e-4064.17Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_VIGMU2.005e-4060.31Vignain OS=Vigna mungo PE=1 SV=1[more]
ACTN_ACTCH7.617e-4061.07Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ACTN_ACTDE9.948e-4061.07Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CPGP1_ZINOF1.299e-3962.40Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CYSEP_PHAVU1.697e-3959.54Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CPR3_ARATH4.937e-3960.80Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CPR4_ARATH3.200e-3859.20Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CYSP2_HORVU7.129e-3857.89Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU1.216e-3757.89Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionC02012H03SK IF1 Citrus clementina cDNA clone C02012H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289411 ID=CX289411; Name=CX289411; organism=Citrus clementina; type=EST; length=395bp
GGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGA
CTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTG
CAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAG
TTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCA
TGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGA
TTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGGTGGCTATATTAGG
ATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCAT
GGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCC
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